Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AL592182.3-201ENST00000642132 3304 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RNA5SP443-201ENST00000363083 132 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RNU6-259P-201ENST00000383999 107 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RNU6-356P-201ENST00000384140 107 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RNU6-517P-201ENST00000384362 110 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 Y_RNA.582-201ENST00000391023 95 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RPS20P2-201ENST00000402520 389 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC005517.2-201ENST00000424673 553 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RPS12P10-201ENST00000427031 377 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC108734.1-201ENST00000439549 399 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AL162591.2-201ENST00000449634 317 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC098824.1-201ENST00000453565 980 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 TMED11P-201ENST00000479478 690 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RPL21P103-201ENST00000479921 488 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 IGLV2-34-201ENST00000490007 283 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC007016.1-201ENST00000512110 244 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RNU6-27P-201ENST00000516146 107 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC100770.1-201ENST00000532310 322 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AL157394.1-201ENST00000562983 1224 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RPL26P30-202ENST00000602923 645 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC090578.1-201ENST00000604955 591 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC098614.4-201ENST00000607601 462 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 OR10AB1P-201ENST00000609613 938 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 AC099669.2-201ENST00000616549 437 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 MTCO1P24-201ENST00000515438 1558 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM54Q9BYV2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 FRG1BP-201ENST00000278882 761 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RN7SKP103-201ENST00000363848 320 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RNA5SP87-201ENST00000384155 118 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL133270.1-201ENST00000402635 279 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL049693.1-201ENST00000402760 611 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RN7SKP216-201ENST00000411050 312 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RPEP2-201ENST00000432149 701 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 CKS1BP5-201ENST00000434172 273 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 ELOCP18-201ENST00000434209 337 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC006466.1-201ENST00000438721 289 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RABEPKP1-201ENST00000440529 1026 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 PGBD4P3-201ENST00000440731 581 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RPL23AP33-201ENST00000442301 452 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 MTND6P13-201ENST00000443510 523 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL590399.6-201ENST00000446396 307 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RPL7AP28-201ENST00000464513 571 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RPS26P28-201ENST00000470806 348 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC093270.2-201ENST00000486157 792 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL358832.1-201ENST00000497800 389 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 RPL37P25-201ENST00000507308 276 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC006390.1-201ENST00000508068 283 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 MTND1P5-201ENST00000517906 940 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC027807.1-201ENST00000559921 996 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 MIR4270-201ENST00000581799 70 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AP003465.2-201ENST00000602571 373 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 LLPHP1-201ENST00000603571 367 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC011468.4-201ENST00000603942 409 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC112230.1-201ENST00000604342 547 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms