Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 RPS29P15-201ENST00000458329 171 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC079804.1-201ENST00000461922 436 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 MRPS17P3-201ENST00000465453 385 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 GMFBP1-201ENST00000467831 427 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 RN7SL222P-201ENST00000476452 299 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC233702.1-201ENST00000482905 502 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC231760.1-201ENST00000498002 260 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 STMN1P2-201ENST00000508435 439 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 PCBP2P3-201ENST00000509726 843 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 Y_RNA.702-201ENST00000516843 96 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 RN7SKP99-201ENST00000517028 307 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 IGKV2D-23-201ENST00000518179 286 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC008489.1-201ENST00000524271 483 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC012417.1-201ENST00000582307 1039 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC005730.3-201ENST00000583067 366 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC010928.3-201ENST00000587712 541 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 SLC25A36P1-201ENST00000590111 465 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC010133.1-201ENST00000615809 842 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AL353748.2-201ENST00000622148 471 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 OR52B1P-201ENST00000316506 909 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 SNORA73.1-201ENST00000363107 205 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 OR9R1P-201ENST00000412200 877 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC068533.1-201ENST00000418542 415 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 SRSF1P1-201ENST00000424058 520 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 SNORD125-201ENST00000459538 96 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC063943.1-201ENST00000465434 453 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 RPS4XP1-201ENST00000482189 787 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC018710.1-201ENST00000506509 158 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 Vault.1-201ENST00000516474 102 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC044860.2-201ENST00000561005 179 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC009852.2-201ENST00000567898 485 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC025034.2-201ENST00000623264 286 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC093648.1-201ENST00000623546 606 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 AC138649.5-201ENST00000637456 137 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 ADAM24P-201ENST00000398655 2101 ntBASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
TRAIPQ9BWF2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 PCAT14-202ENST00000627127 3935 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 RNU5A-1-201ENST00000362698 116 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 U3.2-201ENST00000362981 210 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 Y_RNA.160-201ENST00000363677 92 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AL133388.1-201ENST00000404509 287 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 RNU6-387P-201ENST00000411331 105 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 RPL23AP27-201ENST00000415161 451 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC108075.1-201ENST00000424692 529 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AL513185.2-201ENST00000425543 193 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC093655.2-201ENST00000425735 631 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AL360081.1-201ENST00000428299 555 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 MED28P3-201ENST00000444288 531 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms