Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC055876.5-201ENST00000605667 259 ntBASIC3.41□□□□□ -1.86
SSX3Q99909 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX3Q99909 AC013470.4-201ENST00000619978 986 ntBASIC3.41□□□□□ -1.86
SSX3Q99909 AC112484.5-201ENST00000624189 228 ntBASIC3.41□□□□□ -1.86
SSX3Q99909 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX3Q99909 AC091925.2-201ENST00000625059 256 ntBASIC3.41□□□□□ -1.86
SSX3Q99909 MIR492-201ENST00000638676 116 ntBASIC3.41□□□□□ -1.86
SSX3Q99909 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SSX3Q99909 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.41□□□□□ -1.86
SSX3Q99909 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX3Q99909 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.4□□□□□ -1.86
SSX3Q99909 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.86
SSX3Q99909 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SSX3Q99909 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SSX3Q99909 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 Y_RNA.192-201ENST00000363977 102 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 RNA5SP479-201ENST00000364858 117 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 SNORD3H-201ENST00000384486 214 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 SNORD66.1-201ENST00000391230 76 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 ANAPC10P1-201ENST00000395991 556 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 TAF9BP1-201ENST00000396646 746 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 RPL30P2-201ENST00000414021 291 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 GLRXP1-201ENST00000423261 334 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 DUTP6-201ENST00000425573 462 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 RPL23AP74-201ENST00000437246 471 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 OFD1P3Y-201ENST00000453312 783 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 RPL21P134-201ENST00000453468 483 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC026410.2-201ENST00000460281 156 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX3Q99909 RPS15AP17-201ENST00000470598 390 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX3Q99909 ACTG1P13-201ENST00000486987 1043 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AF213884.1-201ENST00000488102 463 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 RPS27AP13-201ENST00000498403 237 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC006390.1-201ENST00000508068 283 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC116353.3-201ENST00000511215 249 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC109445.1-201ENST00000512356 383 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC105233.3-201ENST00000531125 744 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX3Q99909 OR4K7P-201ENST00000580232 945 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC022662.1-201ENST00000580252 331 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 MIR4637-201ENST00000582405 84 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AP001029.3-201ENST00000588063 596 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 RPL23AP92-201ENST00000603609 255 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AC243773.3-201ENST00000613270 256 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AL110115.1-201ENST00000614396 364 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 AL355810.1-201ENST00000614629 552 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX3Q99909 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 AC010733.2-201ENST00000589496 5702 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
SSX3Q99909 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX3Q99909 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 NCAPGP1-201ENST00000505112 1814 ntBASIC3.4□□□□□ -1.87
SSX3Q99909 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX3Q99909 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SSX3Q99909 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX3Q99909 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX3Q99909 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX3Q99909 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SSX3Q99909 RNU6-878P-201ENST00000384578 110 ntBASIC3.39□□□□□ -1.87
SSX3Q99909 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
SSX3Q99909 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX3Q99909 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX3Q99909 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX3Q99909 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX3Q99909 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSX3Q99909 HIGD1AP11-201ENST00000438361 280 ntBASIC3.39□□□□□ -1.87
SSX3Q99909 RPL17P49-201ENST00000443728 411 ntBASIC3.39□□□□□ -1.87
SSX3Q99909 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.39□□□□□ -1.87
SSX3Q99909 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX3Q99909 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms