Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC084035.1-201ENST00000634543 607 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPAS1Q99742 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPAS1Q99742 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPAS1Q99742 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 Z73965.1-201ENST00000623412 2297 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC139769.1-204ENST00000472297 1931 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC139713.2-214ENST00000642059 1811 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 LINC00622-201ENST00000562811 1570 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 TEX21P-201ENST00000447107 1476 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC126755.2-208ENST00000327792 462 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC138969.1-213ENST00000331436 462 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 RNY4P24-201ENST00000362735 96 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 RNA5SP258-201ENST00000362750 119 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 RNU6-989P-201ENST00000362756 107 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 U3.15-201ENST00000365398 212 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 RNU1-63P-201ENST00000383902 164 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 MIR129-1-201ENST00000384972 72 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 U3.22-201ENST00000391120 215 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 U3.29-201ENST00000391296 212 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AL603766.1-201ENST00000407763 664 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 AL732292.1-201ENST00000426692 226 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 NANOGP6-201ENST00000429190 847 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC096638.2-201ENST00000434965 711 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 RSU1P2-202ENST00000437884 485 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 AL033528.1-201ENST00000453780 140 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 snoU109.1-201ENST00000459339 135 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 OR9M1P-201ENST00000459641 921 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 RPS26P28-201ENST00000470806 348 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC093677.1-201ENST00000514414 678 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 IGHV3-32-201ENST00000519182 355 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AGGF1P4-201ENST00000568249 801 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC034268.2-201ENST00000571784 482 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AL121834.1-201ENST00000572284 509 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS1Q99742 MTND1P15-201ENST00000579262 949 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AC010680.3-201ENST00000604215 520 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC011816.2-201ENST00000607089 556 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AP002360.3-201ENST00000607673 710 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC008498.1-201ENST00000613012 531 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC100793.4-201ENST00000613683 429 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC108479.2-201ENST00000617314 601 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AL596245.1-201ENST00000618994 362 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC018755.4-201ENST00000619715 454 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.07□□□□□ -1.76
NPAS1Q99742 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS1Q99742 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 AL139811.1-201ENST00000424779 2299 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS1Q99742 NXPH1-205ENST00000602349 1953 ntBASIC4.07□□□□□ -1.76
NPAS1Q99742 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NPAS1Q99742 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
NPAS1Q99742 EOGT-210ENST00000615922 1931 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC008033.1-201ENST00000216407 1162 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms