Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RIOK3P1-201ENST00000418778 1528 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 OR4G1P-203ENST00000641984 1631 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AL022311.1-201ENST00000623726 19416 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
SYNGAP1Q96PV0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.315-201ENST00000365117 102 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 SNORA4.3-201ENST00000365564 137 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AL359837.1-201ENST00000381357 287 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.387-201ENST00000383918 102 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.422-201ENST00000384054 114 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.474-201ENST00000384341 102 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 RPL31P52-201ENST00000407532 367 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC078974.1-201ENST00000411597 223 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 UQCRBP1-201ENST00000421129 336 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 GPR143P-201ENST00000434155 205 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MTND3P2-201ENST00000438452 342 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 HMGB1P18-201ENST00000438801 619 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 FGF7P3-201ENST00000454645 303 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC006512.1-201ENST00000468816 291 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 RN7SL319P-201ENST00000480656 221 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC093677.1-201ENST00000514414 678 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 RN7SKP122-201ENST00000515923 296 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC104986.1-201ENST00000517978 436 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 TRMT10BP1-201ENST00000519377 943 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 LARP7P2-201ENST00000575306 125 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC091042.1-201ENST00000579213 173 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MIR3667-201ENST00000581025 74 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MIR4742-201ENST00000581069 85 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MIR3118-1-201ENST00000581787 76 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC004853.1-201ENST00000604902 698 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MIR6839-201ENST00000620425 113 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC091953.2-201ENST00000623979 160 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC034229.5-201ENST00000624258 185 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC138305.3-201ENST00000624988 240 ntBASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNGAP1Q96PV0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.128-201ENST00000363391 112 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-525P-201ENST00000363685 104 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 RNA5SP505-201ENST00000364748 108 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 SNORA70.4-201ENST00000365509 134 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 MIR1-2-201ENST00000384961 85 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 EIF5P1-201ENST00000400019 1231 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 RNU2-50P-201ENST00000410494 143 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 DUTP6-201ENST00000425573 462 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AC006548.1-201ENST00000427470 102 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AC073264.2-201ENST00000448886 166 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AC104563.1-201ENST00000476147 376 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AP003497.1-201ENST00000528472 562 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 AL391358.1-201ENST00000605342 190 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 CR381572.1-201ENST00000625098 102 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 MAPK10-328ENST00000641553 4009 ntBASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SYNGAP1Q96PV0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms