Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC025881.1-201ENST00000518851 512 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC068831.4-201ENST00000556118 109 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 MIR4277-201ENST00000578298 84 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 BBIP1P1-201ENST00000602999 279 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AP000403.1-201ENST00000603349 851 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AL513477.2-201ENST00000607858 568 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC104073.3-201ENST00000610942 955 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC027807.2-201ENST00000616099 408 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC009509.4-201ENST00000619202 509 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AL392088.2-201ENST00000637607 285 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AL356473.1-201ENST00000406203 1408 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AL158163.1-201ENST00000603915 1649 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 Y_RNA.97-201ENST00000363094 102 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 U8.14-201ENST00000390843 143 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 RNA5SP146-201ENST00000410743 123 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AL663109.1-201ENST00000411498 844 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 RPS7P13-201ENST00000413955 498 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 MTND1P28-201ENST00000435623 950 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 RPL37P21-201ENST00000435890 276 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AL356276.2-201ENST00000435919 558 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AL590399.6-201ENST00000446396 307 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 TPT1P13-201ENST00000449760 499 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 RPL23AP81-201ENST00000455252 467 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC011276.1-201ENST00000469688 323 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC006463.2-201ENST00000473326 348 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC024589.1-201ENST00000512207 263 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AF131216.2-201ENST00000512316 564 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AP002963.1-201ENST00000530590 184 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC009643.1-201ENST00000532030 391 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC007424.1-203ENST00000554613 687 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC068790.6-201ENST00000602558 258 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC008745.1-201ENST00000604064 271 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC112187.2-201ENST00000604345 283 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 RNA5SP108-201ENST00000605921 117 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AC090186.1-201ENST00000605991 572 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 AL359715.5-201ENST00000623431 443 ntBASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP3Q96JB5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RNA5SP509-201ENST00000364577 119 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 SNORD82-201ENST00000365530 70 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 U3.22-201ENST00000391120 215 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RPL31P1-201ENST00000398116 372 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 DEFB108C-201ENST00000400154 252 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MIR1179-201ENST00000408703 91 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RNA5SP36-201ENST00000410197 133 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 CDK8P2-201ENST00000415020 547 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AL031779.1-201ENST00000415663 330 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms