Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC110792.1-201ENST00000491826 472 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 RN7SL691P-201ENST00000494487 301 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 UBE2CP3-201ENST00000502715 450 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AL161729.3-201ENST00000603533 673 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 DUXAP11-201ENST00000603858 526 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC011468.4-201ENST00000603942 409 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC080013.3-201ENST00000606839 578 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC007349.4-201ENST00000608114 532 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 AC103710.3-201ENST00000608157 948 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 AL357080.1-201ENST00000617394 239 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SKA1Q96BD8 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 FP325313.1-201ENST00000638228 703 ntBASIC4.25□□□□□ -1.73
SKA1Q96BD8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SKA1Q96BD8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SKA1Q96BD8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SKA1Q96BD8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
SKA1Q96BD8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SKA1Q96BD8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 RN7SKP280-201ENST00000364196 304 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 RN7SKP235-201ENST00000410662 305 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 HMGB1P49-201ENST00000418882 569 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AL139095.3-201ENST00000419672 1203 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 MFSD13B-201ENST00000420133 1290 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC079780.1-201ENST00000428259 207 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AL117339.2-201ENST00000430475 180 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 RPS25P9-201ENST00000435591 252 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 NECAP1P2-201ENST00000455668 727 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 RPL23AP62-201ENST00000463396 453 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC078785.3-201ENST00000476607 425 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 BNIP3P41-201ENST00000503774 571 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC105914.1-201ENST00000511798 226 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 RNU1-61P-201ENST00000516107 151 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 RNA5SP519-201ENST00000516480 119 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 CYCSP2-201ENST00000558168 301 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AP001330.4-201ENST00000604350 154 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC004853.1-201ENST00000604902 698 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AL390208.1-201ENST00000605885 644 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 TUG1_1.1-201ENST00000610654 145 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC095031.1-201ENST00000623685 672 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 AC006927.4-201ENST00000639187 543 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 AP000776.1-201ENST00000530032 1663 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 PRO1804-201ENST00000623780 2050 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 MTND4P34-201ENST00000572715 1371 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 OTUD4P1-201ENST00000237841 3067 ntBASIC4.24□□□□□ -1.73
SKA1Q96BD8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SKA1Q96BD8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SKA1Q96BD8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SKA1Q96BD8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 SNORA62.3-201ENST00000365110 153 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AL359837.1-201ENST00000381357 287 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 USP9YP33-201ENST00000412220 421 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AL356095.1-201ENST00000417217 199 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 BEND7P1-201ENST00000422058 457 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 BMS1P19-201ENST00000433925 393 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 USP9YP35-201ENST00000435696 412 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 MTND3P1-201ENST00000441336 220 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 RPL21P89-201ENST00000444021 467 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms