Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 OR5H2-201ENST00000355273 945 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MTND2P9-201ENST00000422293 931 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MTCO3P16-201ENST00000454456 754 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 USP9YP10-201ENST00000454868 628 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 OR9M1P-201ENST00000459641 921 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 RN7SL860P-201ENST00000473738 223 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC093267.1-201ENST00000489176 961 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 RPS27AP13-201ENST00000498403 237 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 RNU6-415P-201ENST00000516252 97 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 IGKV2-23-201ENST00000518729 323 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 SNRPGP16-201ENST00000533275 226 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC010198.2-201ENST00000550612 259 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC090877.1-201ENST00000561418 344 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MIR5047-201ENST00000579212 100 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AL031176.1-201ENST00000604554 466 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AL450336.1-201ENST00000605180 586 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AL390208.1-201ENST00000605885 644 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC007349.4-201ENST00000608114 532 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC013470.4-201ENST00000619978 986 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AC006927.4-201ENST00000639187 543 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 MTND4P34-201ENST00000572715 1371 ntBASIC3.74□□□□□ -1.81
VPS33AQ96AX1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS33AQ96AX1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 RNU6-328P-201ENST00000390887 106 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 RNU4-65P-201ENST00000410473 140 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 RN7SKP33-201ENST00000410942 340 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 TPT1P2-201ENST00000413105 503 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 SSR1P2-201ENST00000415208 787 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 HMGB1P49-201ENST00000418882 569 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AL953862.1-201ENST00000423016 168 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 CR769776.1-201ENST00000441254 787 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 RPL23AP31-201ENST00000456160 467 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 SNORD11.1-201ENST00000459482 85 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 TRBV12-2-201ENST00000489763 344 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC021146.8-201ENST00000507455 733 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC034205.1-201ENST00000520621 638 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC099489.2-201ENST00000574976 260 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC090615.1-201ENST00000577519 154 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 FAM60BP-201ENST00000578364 658 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 MIR5096-201ENST00000583713 70 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC006116.5-201ENST00000591936 559 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC004853.1-201ENST00000604902 698 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC006270.3-201ENST00000605967 1036 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC080013.3-201ENST00000606839 578 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC103710.3-201ENST00000608157 948 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AL445264.1-201ENST00000621719 171 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC092628.2-201ENST00000622492 339 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC091905.1-201ENST00000624400 311 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 MIR3653-201ENST00000625572 110 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms