Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL133270.1-201ENST00000402635 279 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 Y_RNA.604-201ENST00000410574 102 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC069213.2-201ENST00000420238 366 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 RPS3AP54-201ENST00000435535 734 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC073614.1-201ENST00000438690 650 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL772161.1-201ENST00000439130 476 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 RPL7P36-201ENST00000444633 681 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC002381.1-201ENST00000447049 280 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC073264.2-201ENST00000448886 166 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC104073.1-201ENST00000451988 151 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 MTCO1P42-201ENST00000457379 726 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC010469.1-201ENST00000463864 576 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 RPL5P30-201ENST00000465511 891 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 ACTR3P3-201ENST00000480448 893 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 RPL9P6-201ENST00000492764 598 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC022483.1-201ENST00000514020 567 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 SNORA18.6-201ENST00000516792 115 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 RNU6-430P-201ENST00000517078 107 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC022861.1-201ENST00000522981 663 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC234778.2-201ENST00000566241 354 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 DHX40P1-201ENST00000588725 1412 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL606834.2-201ENST00000602954 668 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL109618.2-201ENST00000605527 211 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 Mico1.1-201ENST00000611698 204 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC138649.3-201ENST00000622154 254 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL445363.3-201ENST00000623080 671 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC099654.13-201ENST00000639774 207 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AC011978.2-201ENST00000569835 2054 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 AL592148.3-201ENST00000608771 2646 ntBASIC4.42□□□□□ -1.7
ATG4AQ8WYN0 ELL2P4-201ENST00000446870 1376 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 OR5P1P-201ENST00000299512 925 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 Y_RNA.248-201ENST00000364501 109 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 RNU6-343P-201ENST00000364709 104 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 RNU6-1283P-201ENST00000365314 105 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 SSXP10-201ENST00000402595 565 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 RNU2-21P-201ENST00000410368 188 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MTCO1P17-201ENST00000411522 491 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 NUP35P2-201ENST00000416748 943 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 C1DP2-201ENST00000418167 426 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 RBMY1KP-201ENST00000423480 476 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 USP9YP9-201ENST00000429406 715 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 ELOCP18-201ENST00000434209 337 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AP000542.1-201ENST00000448473 371 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 PPIAP21-201ENST00000464473 501 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC104563.1-201ENST00000476147 376 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MTAPP1-201ENST00000489154 819 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 PARP4P3-201ENST00000510265 317 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MTCO2P4-201ENST00000517968 247 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC006960.3-201ENST00000561845 705 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms