Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC013828.2-201ENST00000532487 235 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC023161.2-201ENST00000551218 780 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC091489.2-201ENST00000566263 604 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 MIR544B-201ENST00000582372 78 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 LLPHP1-201ENST00000603571 367 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC112187.2-201ENST00000604345 283 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 RN7SKP299-201ENST00000606679 301 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 KPNA2P2-201ENST00000419546 1489 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
HMGB4Q8WW32 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RNU5F-6P-201ENST00000362979 116 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RNA5SP151-201ENST00000365632 117 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RPS12P23-201ENST00000419579 400 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 MTCYBP24-201ENST00000420387 1106 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RPEP2-201ENST00000432149 701 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RSU1P2-202ENST00000437884 485 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RPL23AP46-201ENST00000438548 490 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 COX6CP12-201ENST00000446748 202 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AP000936.2-201ENST00000447151 681 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RPS20P24-201ENST00000457473 361 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AL445433.1-201ENST00000457507 257 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AP001992.1-205ENST00000462248 379 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC104563.1-201ENST00000476147 376 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RN7SL604P-201ENST00000492589 296 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC091435.1-201ENST00000505442 584 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC010460.1-201ENST00000507087 466 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC091965.2-201ENST00000512324 613 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 NPM1P41-201ENST00000512920 831 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RNA5SP446-201ENST00000515955 82 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 RNA5SP73-201ENST00000516744 108 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 DYNLL1P4-201ENST00000549314 266 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AP002360.3-201ENST00000607673 710 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 AC000123.3-201ENST00000624029 4975 ntBASIC4.27□□□□□ -1.73
HMGB4Q8WW32 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGB4Q8WW32 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC092435.4-201ENST00000623012 4159 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC006378.2-201ENST00000623178 2476 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RNU6-28P-201ENST00000362378 107 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RNA5SP307-201ENST00000362863 116 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RNU6-356P-201ENST00000384140 107 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RNU6-761P-201ENST00000384148 107 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RNA5SP56-201ENST00000410277 118 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RN7SKP159-201ENST00000410657 292 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms