Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RNU4-20P-201ENST00000365601 151 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 Y_RNA.378-201ENST00000365652 113 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MT1G-201ENST00000379811 405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 SNORA10-201ENST00000384084 133 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MIR514A2-201ENST00000385131 88 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MIR514A3-201ENST00000385132 88 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC096921.1-201ENST00000411661 375 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC074117.2-201ENST00000417130 397 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC004522.1-201ENST00000419978 654 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 ZNF885P-201ENST00000420174 1098 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC097463.2-201ENST00000421074 142 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPS3AP44-201ENST00000425466 790 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC130360.1-201ENST00000425489 1117 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC006455.1-201ENST00000426550 517 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC093151.1-201ENST00000427711 313 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MICF-203ENST00000432679 129 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPL21P2-201ENST00000440049 481 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPL36AP39-201ENST00000445859 318 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 VN1R34P-201ENST00000447387 883 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPS27AP3-201ENST00000453803 454 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RNU7-138P-201ENST00000459479 64 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC133134.1-201ENST00000466800 359 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AL121769.1-201ENST00000469473 401 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RN7SL370P-201ENST00000470869 295 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPL23AP45-201ENST00000476406 468 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RN7SL737P-201ENST00000490246 282 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPS10P5-201ENST00000492704 531 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC097460.1-202ENST00000507494 769 ntTSL 5 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC006499.6-201ENST00000511169 607 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 SCARNA3-201ENST00000517097 143 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 NARSP2-201ENST00000518524 679 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPL10P18-201ENST00000519384 309 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC087854.1-201ENST00000519706 414 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AL663061.2-201ENST00000538358 233 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC078814.3-201ENST00000553036 491 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MT1G-204ENST00000569500 305 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MIR3117-201ENST00000584034 78 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RPS15AP11-201ENST00000594193 385 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 APOOP1-201ENST00000604695 592 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 RNU6-89P-201ENST00000606519 100 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 U62317.4-201ENST00000609758 448 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 Z73429.1-201ENST00000610170 345 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC092794.1-201ENST00000612734 582 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AP001767.4-201ENST00000624584 452 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 BX322534.1-201ENST00000635574 241 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 AC215524.1-201ENST00000635696 241 ntBASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SVIPQ8NHG7 Z75746.1-201ENST00000440243 2080 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 MTND5P27-201ENST00000428871 1720 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 MTND4P27-201ENST00000450813 1354 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TGIF2LX-201ENST00000283891 906 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 MDP1-201ENST00000288087 730 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 OR10R3P-201ENST00000361688 942 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 SNORD56.1-201ENST00000362913 68 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RNU6-451P-201ENST00000362921 107 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms