Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 SNORA70.24-201ENST00000517233 118 ntBASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 AC010306.1-201ENST00000523223 1117 ntBASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 DUXAP3-201ENST00000603616 594 ntBASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 AC008277.2-201ENST00000605196 797 ntBASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 AC080100.1-201ENST00000624239 5356 ntBASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.2□□□□□ -2.06
TTC9CQ8N5M4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AL512633.1-201ENST00000399931 655 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AL138880.1-201ENST00000405824 642 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AL645937.1-202ENST00000421799 937 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC093716.1-201ENST00000435923 377 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AL606490.8-201ENST00000441624 319 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 RPS3AP12-201ENST00000443616 753 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC112653.1-201ENST00000443851 386 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC003982.1-202ENST00000469928 248 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 RPS29P26-201ENST00000477483 171 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC090525.1-201ENST00000479116 478 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC026427.2-201ENST00000506228 536 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC110792.2-201ENST00000510278 224 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AC113192.3-201ENST00000529152 742 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 AP003122.6-201ENST00000623831 495 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TTC9CQ8N5M4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AP003122.5-201ENST00000527668 3766 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 SNORA14A-201ENST00000364773 135 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 DEFB109C-201ENST00000382575 264 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 DEFB109B-201ENST00000382656 264 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 RNU1-138P-201ENST00000384093 164 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 SNORA44-201ENST00000384584 132 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AL590004.2-201ENST00000404787 371 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AL591034.1-201ENST00000407447 340 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC073310.1-201ENST00000423226 1033 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AL031736.2-201ENST00000426573 787 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC006946.1-201ENST00000429106 328 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 RPL23AP33-201ENST00000442301 452 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 ARL5AP2-201ENST00000444698 533 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AL445669.2-201ENST00000454425 421 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 RPS29P12-201ENST00000460178 152 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC126121.1-201ENST00000482313 553 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC103975.1-201ENST00000482506 483 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC011825.1-201ENST00000484967 388 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 DYNLL1P6-201ENST00000503440 264 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC009901.1-201ENST00000506703 541 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC091826.1-201ENST00000514065 313 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AP001207.1-201ENST00000524051 481 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 DNAJC8P1-201ENST00000554535 372 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 GTF2IP8-201ENST00000560687 584 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 AC005046.1-201ENST00000608515 625 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
TTC9CQ8N5M4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TTC9CQ8N5M4 ARF4P3-201ENST00000397387 509 ntBASIC2.17□□□□□ -2.06
TTC9CQ8N5M4 AL356057.2-201ENST00000403318 432 ntBASIC2.17□□□□□ -2.06
TTC9CQ8N5M4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TTC9CQ8N5M4 AC233728.2-201ENST00000425348 757 ntBASIC2.17□□□□□ -2.06
TTC9CQ8N5M4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.17□□□□□ -2.06
TTC9CQ8N5M4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms