Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL365503.1-201ENST00000605247 905 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC103710.1-201ENST00000610003 901 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 MIR6867-201ENST00000610636 67 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC008250.2-201ENST00000615261 205 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC108479.2-201ENST00000617314 601 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL139089.1-201ENST00000620372 975 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC093648.1-201ENST00000623546 606 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 MIR6863-201ENST00000636112 90 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.59□□□□□ -1.68
SLC44A3Q8N4M1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.59□□□□□ -1.68
SLC44A3Q8N4M1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.59□□□□□ -1.68
SLC44A3Q8N4M1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SLC44A3Q8N4M1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 LINC00622-201ENST00000562811 1570 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-115P-201ENST00000364310 107 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 FCF1P10-201ENST00000407590 479 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC009237.5-201ENST00000414271 501 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AL356095.1-201ENST00000417217 199 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 C1DP2-201ENST00000418167 426 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC073464.1-201ENST00000429823 534 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC109583.1-201ENST00000432156 268 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 BTF3P10-201ENST00000433415 495 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 MTCYBP45-201ENST00000435243 565 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RPS4XP4-201ENST00000443195 763 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC012671.1-201ENST00000451912 203 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 UBA52P3-201ENST00000491303 382 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC012170.1-201ENST00000495139 359 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC093809.1-201ENST00000509155 340 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 NDUFB4P2-201ENST00000509515 391 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AF279873.1-201ENST00000523393 313 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AP001893.2-201ENST00000526949 202 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RN7SL600P-201ENST00000581811 299 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC009977.1-201ENST00000586015 570 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 BNIP3P9-201ENST00000603714 553 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC079587.1-201ENST00000603846 277 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC008536.2-201ENST00000607284 349 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RNU4-89P-201ENST00000607443 133 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AP001521.1-201ENST00000609150 300 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC103710.4-201ENST00000609301 899 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 AC140479.6-201ENST00000633535 357 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 LRRC77P-213ENST00000637727 880 ntBASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SLC44A3Q8N4M1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC117529.2-201ENST00000512159 2068 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 MT-TL1-201ENST00000386347 75 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms