Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 Y_RNA.645-201ENST00000391229 102 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AL590704.1-201ENST00000402856 794 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 PPP1R11P2-201ENST00000423543 382 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 UBE2V1P4-201ENST00000425374 344 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 RPL12P16-201ENST00000431098 498 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 OR3D1P-201ENST00000438288 955 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 snoU13.3-201ENST00000459441 104 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 PPIAP19-201ENST00000486414 492 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC026979.1-201ENST00000492525 396 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC097486.1-201ENST00000515331 210 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 SNORA31.3-201ENST00000516029 96 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 RN7SKP258-201ENST00000517151 304 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC007068.2-201ENST00000543168 395 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC091516.1-201ENST00000549191 703 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC091133.5-201ENST00000603088 301 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC104695.3-201ENST00000604052 296 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC007619.2-201ENST00000605743 379 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AL450472.3-201ENST00000615578 367 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC097063.1-201ENST00000426714 1797 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 AC093849.1-201ENST00000563631 2209 ntBASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
DEPDC4Q8N2C3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 THAP12P5-201ENST00000405864 2275 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 SNORD1C-201ENST00000363315 78 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RNA5SP140-201ENST00000364524 92 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-45P-201ENST00000384471 107 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 SNORA70E-201ENST00000384492 135 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-1222P-201ENST00000384615 107 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-14P-201ENST00000384630 106 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 MT-TR-201ENST00000387439 65 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RPL21P67-201ENST00000402896 478 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 PTMAP6-201ENST00000439110 327 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC099799.1-201ENST00000439809 192 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 Z98949.2-201ENST00000440996 144 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC099670.1-201ENST00000455141 783 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RN7SL413P-201ENST00000482700 297 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 VN1R105P-201ENST00000486595 910 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC022493.2-201ENST00000506122 481 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-635P-201ENST00000516651 102 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC116917.1-201ENST00000520558 305 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC100812.1-201ENST00000607622 580 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 AC024651.2-201ENST00000562480 2098 ntBASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DEPDC4Q8N2C3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC104118.1-201ENST00000607625 1589 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MAPK10-338ENST00000641647 3362 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 RN7SKP250-201ENST00000363924 321 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 RN7SKP186-201ENST00000365371 303 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-784P-201ENST00000384330 106 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AL139039.1-201ENST00000401900 692 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms