Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
SCUBE3Q8IX30 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 SNORA21-201ENST00000362423 132 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RNY1P16-201ENST00000363063 111 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RN7SKP69-201ENST00000365390 305 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RNU6-946P-201ENST00000383878 107 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RNU6-1027P-201ENST00000383998 107 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RNU6-1226P-201ENST00000384317 107 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RNA5SP156-201ENST00000410250 110 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RPL35AP22-201ENST00000436855 335 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC112187.1-201ENST00000455837 479 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC067942.3-201ENST00000512025 362 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC107393.1-201ENST00000512403 346 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 CBX3P4-201ENST00000538909 354 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 MIR3614-201ENST00000581261 86 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC020916.2-201ENST00000591242 360 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 MIR6798-201ENST00000612887 67 ntBASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SCUBE3Q8IX30 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 Y_RNA.48-201ENST00000362710 103 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 RNU1-134P-201ENST00000362935 165 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 RPS4XP7-201ENST00000406274 780 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AL358176.3-201ENST00000420757 454 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC023141.3-201ENST00000436698 278 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 NOP56P2-201ENST00000447491 769 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AP000926.1-201ENST00000479573 241 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 RN7SL432P-201ENST00000484057 298 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC034114.1-201ENST00000520293 285 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC087441.2-201ENST00000529141 262 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC009643.1-201ENST00000532030 391 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AP002392.1-201ENST00000537692 208 ntBASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.45□□□□□ -1.38
SCUBE3Q8IX30 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 RNU6-1284P-201ENST00000363701 100 ntBASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 RN7SKP81-201ENST00000365603 331 ntBASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 RNU6-729P-201ENST00000384399 107 ntBASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 RN7SKP151-201ENST00000410230 316 ntBASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 AL096829.1-201ENST00000413677 457 ntBASIC6.44□□□□□ -1.38
SCUBE3Q8IX30 CHEK2P5-201ENST00000423877 246 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms