Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC127537.2-201ENST00000439258 465 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 HMGN3P1-201ENST00000453847 193 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC005008.1-201ENST00000456151 612 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 RPL21P71-201ENST00000465598 459 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC126121.1-201ENST00000482313 553 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 PHBP14-201ENST00000512887 367 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 RN7SKP83-201ENST00000516512 178 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC103881.1-201ENST00000603476 538 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 RNU6-444P-201ENST00000383988 108 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 U3.19-201ENST00000390893 196 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 RPS24P12-201ENST00000402084 394 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 RPP40P1-201ENST00000426762 456 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 UBE2D3P4-201ENST00000441973 436 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 U3.44-201ENST00000458938 192 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 BZW1P2-201ENST00000473537 826 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 UBE2DNL-203ENST00000474922 222 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 RPS3AP43-201ENST00000479743 781 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 MTCO3P28-201ENST00000513351 515 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 SNORA48.10-201ENST00000516965 160 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 RNU6-232P-201ENST00000517144 64 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AF186190.1-201ENST00000517470 480 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 DUXAP11-201ENST00000603858 526 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AL163642.2-201ENST00000604722 1019 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 CDR1-202ENST00000625883 1485 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRT28Q7Z3Y7 AP000526.1-201ENST00000603308 1388 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 Y_RNA.25-201ENST00000362528 102 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 UBA52P6-201ENST00000399822 382 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AL121978.1-201ENST00000402778 359 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 MTCO3P31-201ENST00000405526 789 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 MIR1302-8-201ENST00000408342 128 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 MIR1289-1-201ENST00000408836 144 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC091862.1-201ENST00000438016 1100 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC093663.1-201ENST00000497190 394 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 FTH1P24-201ENST00000503502 462 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 PPBPP1-201ENST00000510807 373 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 RNU6-1261P-201ENST00000517194 104 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AL356057.1-201ENST00000533798 831 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC018552.3-201ENST00000567416 561 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC090616.2-202ENST00000584248 222 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 PIGPP4-201ENST00000584447 307 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC006270.3-201ENST00000605967 1036 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms