Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC02471-203ENST00000641941 4752 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 SNORD35B-201ENST00000363660 87 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 ARF4P3-201ENST00000397387 509 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 SNRPEP2-201ENST00000397592 279 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 SNORA3C-201ENST00000408792 125 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RNA5SP317-201ENST00000410176 116 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RNA5SP311-201ENST00000411290 116 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 HIGD1AP4-201ENST00000430194 280 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RPS4XP4-201ENST00000443195 763 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 HSFY6P-201ENST00000445573 403 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC103987.1-201ENST00000473394 348 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RPS27AP1-201ENST00000475545 471 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC068587.1-201ENST00000483613 781 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC021146.5-201ENST00000503544 545 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC105914.1-201ENST00000511798 226 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RNA5SP315-201ENST00000516340 116 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RNA5SP312-201ENST00000517068 116 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 PDCL2P2-201ENST00000533651 189 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC018630.1-201ENST00000541376 925 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LRRC34P1-201ENST00000542742 915 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 DUXAP1-201ENST00000556632 463 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AL354943.1-201ENST00000572103 781 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC245036.5-201ENST00000596330 847 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC114878.2-201ENST00000604863 1251 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AL451044.1-201ENST00000604867 238 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC010738.1-201ENST00000604970 987 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AL158042.1-201ENST00000605338 460 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC011816.2-201ENST00000607089 556 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AL049780.3-201ENST00000624612 1583 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC00561-201ENST00000565815 2738 ntBASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP54Q7Z3B4 AC118273.1-201ENST00000525324 3006 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 TAS2R15P-201ENST00000390674 928 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC016769.3-201ENST00000396562 315 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 RNU6-712P-201ENST00000410558 100 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 HMGB3P23-201ENST00000414981 585 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 DUTP6-201ENST00000425573 462 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 OR5BE1P-201ENST00000425977 939 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC004975.1-201ENST00000428733 208 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 MTND1P32-201ENST00000433043 938 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 TRGVB-201ENST00000453257 471 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 PLGLA-201ENST00000465668 449 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC108941.1-201ENST00000502853 530 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC139783.2-201ENST00000504847 1145 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms