Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 SNORA41-201ENST00000384675 132 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AL024474.1-201ENST00000404655 591 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 RN7SKP235-201ENST00000410662 305 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 Y_RNA.626-201ENST00000411288 95 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 RPS20P5-201ENST00000434808 360 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 FTH1P8-201ENST00000498161 514 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 SNORA70.20-201ENST00000516848 126 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 CYCSP22-201ENST00000517555 339 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AL589674.2-201ENST00000604304 337 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 AC008669.1-201ENST00000565823 2178 ntBASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RNA5SP375-201ENST00000362975 119 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RN7SKP128-201ENST00000364270 303 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RNA5SP132-201ENST00000364725 118 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RNU6-611P-201ENST00000384276 104 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AL357075.1-201ENST00000404107 726 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RPS27AP3-201ENST00000453803 454 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AL035090.1-201ENST00000454835 332 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 snoU13.8-201ENST00000458890 104 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RPL9P32-201ENST00000464118 620 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AL049714.1-201ENST00000466686 347 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RPL21P6-201ENST00000479171 504 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC114728.1-201ENST00000488289 483 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC005912.1-201ENST00000495392 255 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RNU6-1333P-201ENST00000516162 93 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 MTND4P7-201ENST00000523876 130 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 AC105224.1-201ENST00000587055 421 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RPL23AP92-201ENST00000603609 255 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 uc_338.34-201ENST00000617467 174 ntBASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF7Q6Q0C0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 RNU6-562P-201ENST00000362731 107 ntBASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 RN7SKP160-201ENST00000363804 340 ntBASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 Y_RNA.183-201ENST00000363882 113 ntBASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 RNU4-50P-201ENST00000364361 141 ntBASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 RNU4-42P-201ENST00000364738 142 ntBASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 SNORA51.11-201ENST00000384442 131 ntBASIC6.6□□□□□ -1.35
TRAF7Q6Q0C0 RNY4P18-201ENST00000391107 89 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms