Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 MFSD8-219ENST00000641228 2559 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.152-201ENST00000363578 100 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 RNU6-641P-201ENST00000384006 107 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.424-201ENST00000384063 103 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.785-201ENST00000384290 109 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 EIF4E2P1-201ENST00000393781 255 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 RNA5SP156-201ENST00000410250 110 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 E2F6P2-201ENST00000420708 748 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AL590632.1-201ENST00000424289 371 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AL359265.2-201ENST00000434367 631 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AL359672.1-201ENST00000442302 409 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 RPL23AP15-201ENST00000450202 459 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 RANP2-201ENST00000456833 229 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 RPL39P38-201ENST00000467018 153 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.667-201ENST00000516212 107 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 SCARNA16.2-201ENST00000516520 172 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 SNORA81.3-201ENST00000517283 198 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 FTH1P11-201ENST00000517577 551 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AC008562.1-201ENST00000521763 330 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 AC024224.1-201ENST00000538284 609 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 OR11H5P-201ENST00000554039 926 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 AC009852.2-201ENST00000567898 485 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 MRO-208ENST00000588444 866 ntTSL 3 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 AC068790.3-201ENST00000602988 553 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 MTND4LP5-201ENST00000605152 292 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6□□□□□ -1.45
FOXR1Q6PIV2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
FOXR1Q6PIV2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXR1Q6PIV2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC007938.2-201ENST00000604666 2634 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC144833.1-201ENST00000567953 4089 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RNA5SP242-201ENST00000364171 118 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 SNORA43.1-201ENST00000364863 140 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RNU6-317P-201ENST00000384031 107 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RNU6-1093P-201ENST00000391194 107 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 MIR450B-201ENST00000401182 78 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 MIR1252-201ENST00000408861 65 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RN7SKP235-201ENST00000410662 305 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 ELOCP20-201ENST00000422460 345 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 MTND6P12-201ENST00000428247 522 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC093156.1-201ENST00000440382 670 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC114495.1-201ENST00000441274 436 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RN7SL352P-201ENST00000466002 277 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RPL7P5-201ENST00000471472 736 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC022215.1-201ENST00000481770 362 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RPL23AP41-201ENST00000484754 458 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 GLUD1P3-202ENST00000508551 200 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 RNA5SP438-201ENST00000516561 112 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.710-201ENST00000516975 110 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AL137161.1-201ENST00000532231 390 ntBASIC5.99□□□□□ -1.45
FOXR1Q6PIV2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms