Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC010653.1-201ENST00000571108 881 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 MIR5583-1-201ENST00000580941 59 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 AL512782.1-201ENST00000603093 364 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 AL355816.1-201ENST00000607951 118 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 AC244100.1-202ENST00000621554 382 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 Z69720.2-201ENST00000624755 279 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 AC092376.2-201ENST00000622621 4116 ntBASIC6.49□□□□□ -1.37
RNF20Q5VTR2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF20Q5VTR2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AL139276.1-201ENST00000311910 1001 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 RNU6-26P-201ENST00000383985 107 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MIR1282-201ENST00000408865 101 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MED13P1-201ENST00000428342 171 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AL359265.2-201ENST00000434367 631 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 UBE2V1P13-201ENST00000436983 439 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC020550.1-201ENST00000447385 163 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC092754.1-201ENST00000472975 479 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 RPL7P43-201ENST00000478876 753 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 FTH1P21-201ENST00000512179 511 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 RNU6-1213P-201ENST00000517075 94 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 HMGB1P19-201ENST00000517578 577 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 IMMP1LP2-201ENST00000552954 492 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 SETP2-201ENST00000553886 926 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC015720.2-201ENST00000567709 334 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC090615.1-201ENST00000577519 154 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MIR4703-201ENST00000577728 79 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC108738.1-201ENST00000603703 237 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 Z82243.1-201ENST00000609432 473 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AL157817.1-201ENST00000614264 790 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC109583.2-201ENST00000617367 129 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC127024.6-201ENST00000621598 424 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 XPOTP1-201ENST00000443317 2398 ntBASIC6.48□□□□□ -1.37
RNF20Q5VTR2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RNF20Q5VTR2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 MAPK10-338ENST00000641647 3362 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 Y_RNA.5-201ENST00000362334 102 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 Y_RNA.167-201ENST00000363735 109 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 RNU5A-8P-201ENST00000364102 114 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 U3.11-201ENST00000364476 212 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 Y_RNA.476-201ENST00000384347 108 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 Y_RNA.527-201ENST00000384573 102 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 SNORA48.4-201ENST00000391089 134 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 DBIP1-201ENST00000401435 260 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 MCFD2P1-201ENST00000417812 300 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AL139396.1-201ENST00000421137 167 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AC021382.1-201ENST00000483523 359 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 RPS24P16-201ENST00000497294 392 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms