Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.180-201ENST00000363867 113 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 RNU6-343P-201ENST00000364709 104 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 SNORA20.1-201ENST00000364790 130 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 RNU1-115P-201ENST00000365329 160 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 MIR320B1-201ENST00000390209 79 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 RNU6-328P-201ENST00000390887 106 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 NDUFS5P1-201ENST00000405668 289 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 MIR1182-201ENST00000408363 97 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 BX323014.1-201ENST00000412876 237 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC048351.1-201ENST00000420064 602 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 EI24P4-201ENST00000423683 1078 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 RPL23AP4-201ENST00000427757 463 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 KNOP1P3-201ENST00000446933 426 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AL590664.1-201ENST00000448065 339 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC026410.2-201ENST00000460281 156 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AL049714.1-201ENST00000466686 347 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 HMGN1P9-201ENST00000515212 298 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 RNU6-138P-201ENST00000515952 107 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AF279873.1-201ENST00000523393 313 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AP003497.1-201ENST00000528472 562 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC068993.1-201ENST00000546724 589 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 SULT1C2P1-202ENST00000562418 459 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 MIR7641-1-201ENST00000627518 61 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC073869.8-201ENST00000641806 335 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AL731566.1-201ENST00000620490 1937 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC092747.4-201ENST00000620519 1861 ntBASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.77□□□□□ -1.33
RC3H1Q5TC82 AC144833.1-201ENST00000567953 4089 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MTCO1P7-201ENST00000419523 1542 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RN7SKP95-201ENST00000362860 303 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 SNORD3E-201ENST00000362899 217 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RNU6-490P-201ENST00000362985 107 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RNU6-774P-201ENST00000363238 107 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RNU6-200P-201ENST00000364743 107 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.380-201ENST00000365663 111 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 HSPA8P15-201ENST00000401676 786 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 DPPA2P2-201ENST00000418220 897 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AL606753.1-201ENST00000427435 87 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RNU7-182P-201ENST00000459009 62 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 snoU13.20-201ENST00000459180 104 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MED28P2-201ENST00000475771 317 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC025465.3-201ENST00000510570 311 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MTND1P19-201ENST00000511780 315 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RN7SKP283-201ENST00000517197 270 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MTND4P7-201ENST00000523876 130 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RN7SL52P-201ENST00000584271 284 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AC078899.3-201ENST00000599065 212 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AL121992.2-201ENST00000606262 256 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 AL021879.1-201ENST00000611756 288 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 uc_338.34-201ENST00000617467 174 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RN7SL722P-201ENST00000617780 284 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RN7SL565P-201ENST00000618246 284 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 RNF6P1-201ENST00000444889 1784 ntBASIC6.76□□□□□ -1.33
RC3H1Q5TC82 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms