Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AGGF1P8-201ENST00000562979 1000 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AC008277.2-201ENST00000605196 797 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 MIR6715B-201ENST00000637172 77 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AL512633.1-201ENST00000399931 655 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AL450338.1-201ENST00000407987 512 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 RPL23AP36-201ENST00000413895 458 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 ST13P20-201ENST00000447996 1065 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 TRBV1-201ENST00000476502 284 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC011037.1-201ENST00000483964 558 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 NPM1P35-201ENST00000533043 868 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC007423.1-201ENST00000605009 627 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 VN1R9P-201ENST00000614184 867 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 AC005539.1-201ENST00000443768 1479 ntBASIC3.25□□□□□ -1.89
NUP188Q5SRE5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NUP188Q5SRE5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AL357520.1-201ENST00000441557 453 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 MTCYBP14-201ENST00000457471 715 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AP001317.1-201ENST00000531194 960 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AL162233.1-201ENST00000620014 944 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 SNORA80E-201ENST00000384744 137 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AL121882.1-201ENST00000422893 417 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 UBE2V2P4-201ENST00000447495 259 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 EIF2S2P4-201ENST00000461070 984 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC147055.1-201ENST00000509261 750 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC108729.3-201ENST00000513484 108 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AP000857.1-201ENST00000532151 543 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 OR8L1P-201ENST00000534005 955 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 PDCD5P1-201ENST00000543528 309 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC012119.1-201ENST00000603184 222 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC104237.2-201ENST00000612456 443 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 CRYM-AS1-204ENST00000637983 556 ntBASIC3.24□□□□□ -1.89
NUP188Q5SRE5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP188Q5SRE5 AC022336.2-201ENST00000568966 2538 ntBASIC3.23□□□□□ -1.89
NUP188Q5SRE5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NUP188Q5SRE5 AC087565.3-202ENST00000642085 1603 ntBASIC3.23□□□□□ -1.89
NUP188Q5SRE5 GSTA9P-201ENST00000406231 611 ntBASIC3.23□□□□□ -1.89
NUP188Q5SRE5 RPS15AP6-201ENST00000420703 385 ntBASIC3.23□□□□□ -1.89
NUP188Q5SRE5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP188Q5SRE5 AC009570.1-201ENST00000609599 745 ntBASIC3.23□□□□□ -1.89
NUP188Q5SRE5 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP188Q5SRE5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NUP188Q5SRE5 ZNF542P-204ENST00000482727 1305 ntBASIC3.23□□□□□ -1.89
NUP188Q5SRE5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP188Q5SRE5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NUP188Q5SRE5 MTCO3P31-201ENST00000405526 789 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC009414.1-201ENST00000427200 443 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 RPL23AP70-201ENST00000483361 460 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 HMGB3P26-201ENST00000560051 582 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 VN1R79P-201ENST00000593540 513 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AL136981.2-201ENST00000617319 734 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 WWP1P1-201ENST00000466609 2769 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AL024474.1-201ENST00000404655 591 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC092045.1-201ENST00000495716 1231 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC068305.1-201ENST00000497406 726 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms