Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC087373.1-201ENST00000524920 491 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AP004371.1-201ENST00000525240 214 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AP001004.1-201ENST00000582468 324 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 RPL12P25-202ENST00000598100 674 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 MTCYBP22-201ENST00000603788 447 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC079587.1-201ENST00000603846 277 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC004908.3-201ENST00000610248 625 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 uc_338.32-201ENST00000615087 172 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC138649.5-201ENST00000637456 137 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 FP325313.1-201ENST00000638228 703 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC006927.3-201ENST00000638789 384 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC38Q502W7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC38Q502W7 AL157700.1-201ENST00000561973 1432 ntBASIC4.4□□□□□ -1.7
CCDC38Q502W7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC38Q502W7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC38Q502W7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 MIR423-201ENST00000362201 94 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 RNU6-398P-201ENST00000384143 109 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 RNA5SP332-201ENST00000391063 115 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC007066.1-201ENST00000392902 381 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL583835.1-201ENST00000399570 407 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 MIR1305-201ENST00000408300 86 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 RNU6-920P-201ENST00000410926 92 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 RPS7P15-201ENST00000415804 584 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL590139.1-201ENST00000416267 400 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 COX6CP17-201ENST00000421389 185 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 RPL23AP1-201ENST00000428990 471 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL831737.1-201ENST00000441288 271 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 DHFRP3-201ENST00000455595 559 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC091564.1-201ENST00000464563 479 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 NIPA2P2-201ENST00000496376 1083 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC078918.1-201ENST00000498515 228 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC022447.3-201ENST00000506865 495 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC034159.1-201ENST00000513885 583 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 Y_RNA.688-201ENST00000516565 95 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 RAB9BP1-201ENST00000519581 626 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL121603.1-201ENST00000553815 142 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC006270.2-201ENST00000578523 652 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC114878.2-201ENST00000604863 1251 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC097468.3-201ENST00000607956 456 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC106028.5-201ENST00000610332 395 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC012409.3-201ENST00000611343 981 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 MIR7844-201ENST00000616161 122 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 AL356585.4-201ENST00000623078 1229 ntBASIC4.4□□□□□ -1.71
CCDC38Q502W7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC38Q502W7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC38Q502W7 AC092447.10-201ENST00000620607 1652 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL672167.1-206ENST00000356293 943 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 Y_RNA.234-201ENST00000364409 97 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 RNU6-744P-201ENST00000365557 107 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 RNU6-1316P-201ENST00000384242 108 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 RHEBP3-201ENST00000411920 351 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC119751.6-201ENST00000416712 186 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL161631.1-201ENST00000417933 486 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC009518.2-201ENST00000418056 731 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC090960.1-201ENST00000421072 306 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 Z99497.1-201ENST00000421282 135 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 CHIAP3-201ENST00000423668 1133 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL390023.1-201ENST00000428836 262 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL512649.1-201ENST00000428997 581 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms