Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AL390862.1-201ENST00000635467 1469 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 SNRPEP3-201ENST00000338402 276 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 RNU6-931P-201ENST00000363850 107 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 SNORD46.1-201ENST00000364139 104 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 SNORA4.1-201ENST00000364263 144 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 ATP5F1P4-201ENST00000397288 746 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC098592.1-201ENST00000419352 333 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AL593851.1-201ENST00000426171 157 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC011742.1-201ENST00000431448 434 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AL356535.1-201ENST00000440335 398 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 MTND2P20-201ENST00000440805 661 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 MTCYBP11-201ENST00000447254 1109 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 RSL24D1P3-201ENST00000449255 495 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 RPL18AP17-201ENST00000455326 198 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 TRBV26-201ENST00000456572 344 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 NCOR1P1-202ENST00000486162 291 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 UBE2CP3-201ENST00000502715 450 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC147055.4-201ENST00000504399 745 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC006499.5-201ENST00000505037 514 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 UBE2NP1-201ENST00000545592 458 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 MIR5187-201ENST00000583479 76 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 MIR4999-201ENST00000585029 91 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC106791.2-201ENST00000604680 391 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC103706.2-201ENST00000638080 240 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 AC009093.8-201ENST00000641769 292 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
USP41Q3LFD5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP41Q3LFD5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC024560.2-201ENST00000507981 1497 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP41Q3LFD5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP41Q3LFD5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP41Q3LFD5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 RNU6-1200P-201ENST00000384162 107 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 USP9YP33-201ENST00000412220 421 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AL022400.1-201ENST00000423946 935 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC091286.1-201ENST00000431233 461 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 USP9YP35-201ENST00000435696 412 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AL591503.2-201ENST00000442314 1005 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 RNU7-125P-201ENST00000458760 62 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 RNF138P1-201ENST00000502765 546 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC093534.1-201ENST00000504977 132 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC026412.2-201ENST00000512270 1075 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC118465.1-201ENST00000513820 1271 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 RNU6-583P-201ENST00000516012 92 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC135001.1-201ENST00000544546 283 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC010680.4-201ENST00000605334 543 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC112220.3-201ENST00000605502 502 ntBASIC4.11□□□□□ -1.75
USP41Q3LFD5 AC069200.1-201ENST00000609511 323 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms