Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL049780.3-201ENST00000624612 1583 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL161781.1-201ENST00000354277 403 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RNU6-553P-201ENST00000364047 96 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RNA5SP509-201ENST00000364577 119 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RNU6-629P-201ENST00000384061 103 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 MIR659-201ENST00000384963 97 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC007066.1-201ENST00000392902 381 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 MIR1911-201ENST00000410783 80 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RAB28P1-201ENST00000411517 641 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RPS7P15-201ENST00000415804 584 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 HSFY4P-201ENST00000415994 1181 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 EI24P1-201ENST00000416584 867 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 MTCO3P12-201ENST00000416718 547 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 COX6CP17-201ENST00000421389 185 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC016712.1-201ENST00000431088 378 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 PHBP16-201ENST00000446318 950 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 ABCF2P2-201ENST00000450549 296 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CEACAMP4-201ENST00000457676 421 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RN7SL98P-201ENST00000462271 300 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RPS27AP17-201ENST00000463344 455 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC092451.1-201ENST00000480211 153 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AP001025.2-201ENST00000490908 477 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC106872.3-201ENST00000495104 446 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC111000.2-201ENST00000507775 550 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC034159.1-201ENST00000513885 583 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 RNU2-58P-201ENST00000516403 183 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 MTCO1P47-201ENST00000523889 1271 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 OR5AP1P-201ENST00000529730 940 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC013828.2-201ENST00000532487 235 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL121603.1-201ENST00000553815 142 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 PSMB7P1-201ENST00000556349 514 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC012669.1-201ENST00000603209 283 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC006338.2-201ENST00000616864 791 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 uc_338.13-201ENST00000618243 179 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 MIR4727-201ENST00000622232 55 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL356266.1-201ENST00000623311 483 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC091931.1-201ENST00000623488 728 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC092192.1-201ENST00000633154 1018 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
PCGF3Q3KNV8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PCGF3Q3KNV8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.81
PCGF3Q3KNV8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AC116096.1-201ENST00000566804 2314 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 Y_RNA.234-201ENST00000364409 97 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 RNU6-744P-201ENST00000365557 107 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 RNU6-1316P-201ENST00000384242 108 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AL356421.1-201ENST00000403255 413 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 RNU2-47P-201ENST00000410649 186 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 TMSB10P2-201ENST00000416049 131 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 TOMM22P1-201ENST00000418578 312 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 CHIAP3-201ENST00000423668 1133 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 C4BPAP2-201ENST00000428434 478 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 RPL21P112-201ENST00000434403 463 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AC114495.1-201ENST00000441274 436 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 NPM1P49-201ENST00000448027 714 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 MTCO1P27-201ENST00000448269 226 ntBASIC3.77□□□□□ -1.81
PCGF3Q3KNV8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms