Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR2276-201ENST00000516886 89 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 AC124283.4-201ENST00000581815 456 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 BNIP3P4-201ENST00000604946 565 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 AL162274.2-201ENST00000614406 332 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 AC006386.2-201ENST00000624491 75 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 AC012005.1-201ENST00000624575 75 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 AL590396.4-201ENST00000636779 956 ntBASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.84□□□□□ -1.79
SHROOM1Q2M3G4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.84□□□□□ -1.8
SHROOM1Q2M3G4 AC007256.1-201ENST00000392253 2765 ntBASIC3.84□□□□□ -1.8
SHROOM1Q2M3G4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.84□□□□□ -1.8
SHROOM1Q2M3G4 RNU6-207P-201ENST00000384137 107 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AL138880.1-201ENST00000405824 642 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RPL23AP47-201ENST00000408017 460 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RNA5SP229-201ENST00000410809 99 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC005517.2-201ENST00000424673 553 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RPL21P66-201ENST00000426566 466 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC006028.1-201ENST00000438379 402 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AL929288.2-201ENST00000446368 407 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RPL23AP15-201ENST00000450202 459 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RN7SL863P-201ENST00000462370 296 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC011825.1-201ENST00000484967 388 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 HMGB1P38-201ENST00000490557 577 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RNF138P1-201ENST00000502765 546 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 MIR4474-201ENST00000579189 78 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC008121.2-201ENST00000614647 523 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 AC018926.3-201ENST00000618841 406 ntBASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM1Q2M3G4 ZNF849P-201ENST00000594711 1566 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 RNU6-468P-201ENST00000384003 109 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 MIR634-201ENST00000385208 97 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 TAF9BP1-201ENST00000396646 746 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AL603865.2-201ENST00000401679 213 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AL355615.1-201ENST00000406187 641 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 RPL5P18-201ENST00000406671 891 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AL353678.1-201ENST00000422735 741 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC002075.2-201ENST00000425207 252 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC013262.1-201ENST00000426710 252 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AL662791.1-201ENST00000441992 928 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 MTND1P33-201ENST00000446251 917 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC008280.2-201ENST00000455473 307 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 SYPL1P1-201ENST00000473622 768 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 MTND3P3-201ENST00000505004 126 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 IGHV3-76-201ENST00000522465 295 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AP000926.4-201ENST00000527351 454 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AP003066.2-201ENST00000529375 555 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 UBL5P2-201ENST00000583788 219 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC068620.3-201ENST00000602749 560 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 BNIP3P31-201ENST00000604515 566 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC073657.2-201ENST00000605661 303 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC135507.2-201ENST00000612443 309 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 AC110774.1-201ENST00000623567 2018 ntBASIC3.82□□□□□ -1.8
SHROOM1Q2M3G4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AF117829.1-206ENST00000621883 3802 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms