Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 RNU6-488P-201ENST00000515918 99 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 SNORA64.4-201ENST00000516632 81 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 RN7SKP289-201ENST00000517244 295 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 MRPS36P3-201ENST00000519284 130 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 TRMT10BP1-201ENST00000519377 943 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX1Q15475 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX1Q15475 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC061975.8-201ENST00000587058 721 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC025588.2-201ENST00000604851 466 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 AC107075.1-201ENST00000613695 314 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 AC023158.2-201ENST00000614876 543 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 AC039056.2-201ENST00000622261 511 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 AP002782.1-201ENST00000623107 614 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 SRP72P2-201ENST00000344851 1979 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SIX1Q15475 CR383658.2-201ENST00000547576 1525 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX1Q15475 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX1Q15475 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX1Q15475 AC007529.1-201ENST00000418574 2178 ntBASIC3.48□□□□□ -1.85
SIX1Q15475 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
SIX1Q15475 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX1Q15475 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX1Q15475 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX1Q15475 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX1Q15475 AL365440.1-201ENST00000436135 2167 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIX1Q15475 RNA5SP391-201ENST00000363456 119 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 SNORA73.2-201ENST00000364946 201 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX1Q15475 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX1Q15475 AL590084.1-201ENST00000407885 387 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 RPS15AP6-201ENST00000420703 385 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC233981.1-201ENST00000423224 461 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 RPL7P44-201ENST00000424827 742 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC092447.3-201ENST00000426027 686 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC010881.1-201ENST00000433830 235 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AL645939.1-201ENST00000453429 797 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 MTCYBP16-201ENST00000509187 1129 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC093755.1-201ENST00000512950 1023 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 IGKV2-26-201ENST00000518305 343 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 IGHV3-32-201ENST00000519182 355 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 OR4R3P-201ENST00000525084 838 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX1Q15475 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX1Q15475 AC022662.1-201ENST00000580252 331 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 MIR4444-1-201ENST00000581696 74 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 MIR4444-2-201ENST00000584390 74 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC245036.5-201ENST00000596330 847 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 Z99289.3-201ENST00000605586 594 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC009464.1-201ENST00000615731 469 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AC021755.4-201ENST00000616620 456 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 AP002791.1-201ENST00000623291 381 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIX1Q15475 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX1Q15475 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX1Q15475 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX1Q15475 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX1Q15475 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.47□□□□□ -1.85
SIX1Q15475 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SIX1Q15475 AC107081.3-201ENST00000612715 2034 ntBASIC3.46□□□□□ -1.86
SIX1Q15475 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SIX1Q15475 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIX1Q15475 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIX1Q15475 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX1Q15475 RNU6-1293P-201ENST00000384077 107 ntBASIC3.46□□□□□ -1.86
SIX1Q15475 MIR449B-201ENST00000384995 97 ntBASIC3.46□□□□□ -1.86
SIX1Q15475 TAS2R15P-201ENST00000390674 928 ntBASIC3.46□□□□□ -1.86
SIX1Q15475 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX1Q15475 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX1Q15475 AC004022.2-201ENST00000413824 193 ntBASIC3.46□□□□□ -1.86
SIX1Q15475 AC008280.1-201ENST00000418851 412 ntBASIC3.46□□□□□ -1.86
SIX1Q15475 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX1Q15475 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms