Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 A2MP1-204ENST00000566278 4130 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SSRP1Q08945 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 Y_RNA.9-201ENST00000362354 101 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 RNU6-359P-201ENST00000365466 108 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 SNORD96B-201ENST00000386148 79 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 U3.29-201ENST00000391296 212 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.32□□□□□ -1.56
SSRP1Q08945 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.32□□□□□ -1.56
SSRP1Q08945 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 PSMA2P3-201ENST00000429685 675 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 EZH2P1-201ENST00000431167 291 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.32□□□□□ -1.56
SSRP1Q08945 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 C1DP4-201ENST00000455429 424 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 RPS20P24-201ENST00000457473 361 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 AC010326.1-201ENST00000462726 602 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC114967.1-201ENST00000504890 259 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 SAP18P1-201ENST00000512058 390 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AL671862.1-201ENST00000515851 349 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AP001893.2-201ENST00000526949 202 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 RPS3AP4-201ENST00000555161 764 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.32□□□□□ -1.56
SSRP1Q08945 AC091178.1-203ENST00000584586 279 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 HMGB2P1-201ENST00000591146 634 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC008966.2-201ENST00000606157 453 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AC011816.2-201ENST00000607089 556 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 Mico1.1-201ENST00000611698 204 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 MLECP1-201ENST00000615893 709 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.32□□□□□ -1.56
SSRP1Q08945 MAPK10-286ENST00000641208 8747 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 AL359893.1-201ENST00000447628 1580 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.32□□□□□ -1.56
SSRP1Q08945 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
SSRP1Q08945 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSRP1Q08945 MTND5P33-201ENST00000571250 1450 ntBASIC5.32□□□□□ -1.56
SSRP1Q08945 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSRP1Q08945 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSRP1Q08945 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSRP1Q08945 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 OR4K15-201ENST00000305051 1216 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC021146.4-201ENST00000309229 279 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 Y_RNA.372-201ENST00000365599 102 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 RPL23AP32-201ENST00000395315 459 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AL590002.1-201ENST00000406554 418 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 RN7SKP216-201ENST00000411050 312 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.31□□□□□ -1.56
SSRP1Q08945 DPPA2P1-201ENST00000428060 556 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 RPL31P35-201ENST00000431058 377 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC000111.3-201ENST00000433478 193 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC122718.1-201ENST00000439448 744 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AL049734.2-201ENST00000441066 616 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 PTMAP3-201ENST00000447474 330 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSRP1Q08945 FAM133DP-201ENST00000464802 691 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AC021382.1-201ENST00000483523 359 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 RPL23AP41-201ENST00000484754 458 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AC116353.2-201ENST00000505332 712 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AC010342.1-201ENST00000514047 877 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.31□□□□□ -1.56
SSRP1Q08945 RNA5SP446-201ENST00000515955 82 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 SETP2-201ENST00000553886 926 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AL845331.3-202ENST00000562856 261 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AC004853.1-201ENST00000604902 698 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AL365503.1-201ENST00000605247 905 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 AL161734.1-201ENST00000609720 557 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AL590282.1-201ENST00000610379 1136 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC100827.5-201ENST00000615883 426 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC009268.2-201ENST00000621925 457 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSRP1Q08945 PABPC1P7-201ENST00000413177 1513 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 AC024560.2-201ENST00000507981 1497 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms