Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC008013.2-202ENST00000637965 364 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH1Q08174 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH1Q08174 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDH1Q08174 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH1Q08174 MIR375-201ENST00000362103 64 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 RNA5SP326-201ENST00000363209 110 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 RNA5SP131-201ENST00000365452 119 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 EIF4E2P1-201ENST00000393781 255 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 MIR548F4-201ENST00000408515 105 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 RNU6-985P-201ENST00000410182 104 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 RNU2-21P-201ENST00000410368 188 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 NUP35P1-201ENST00000422734 947 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC007161.1-204ENST00000423039 460 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC092162.1-201ENST00000432828 434 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AL451139.1-201ENST00000434718 346 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AP006222.1-205ENST00000450734 457 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 DHFRP3-201ENST00000455595 559 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC006967.1-201ENST00000467608 589 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PCDH1Q08174 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 SNORA70.20-201ENST00000516848 126 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 RNU6-794P-201ENST00000517261 64 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 FTH1P11-201ENST00000517577 551 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDH1Q08174 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AC023043.2-201ENST00000589678 1026 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC010680.4-201ENST00000605334 543 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC015982.1-201ENST00000608113 465 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AL139124.1-201ENST00000609123 421 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AL357559.1-201ENST00000622228 274 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC022418.1-201ENST00000624118 445 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AL353662.3-201ENST00000625131 237 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH1Q08174 AP005432.1-201ENST00000580891 3485 ntBASIC5.44□□□□□ -1.54
PCDH1Q08174 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH1Q08174 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH1Q08174 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH1Q08174 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH1Q08174 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
PCDH1Q08174 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH1Q08174 BCORP1-203ENST00000513194 5093 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH1Q08174 Z95327.2-201ENST00000414579 1873 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH1Q08174 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH1Q08174 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU6-1287P-201ENST00000362914 107 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 Y_RNA.158-201ENST00000363651 101 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU6-61P-201ENST00000365528 109 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH1Q08174 SNORA24.1-201ENST00000384401 135 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU6-601P-201ENST00000384540 107 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU6-1060P-201ENST00000384664 107 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 Y_RNA.576-201ENST00000384781 102 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 DBIP1-201ENST00000401435 260 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU4-46P-201ENST00000410818 138 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC114491.1-201ENST00000416095 246 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms