Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DPPA2P1-201ENST00000428060 556 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 TIMM9P3-201ENST00000428659 274 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 RPL31P35-201ENST00000431058 377 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC112498.1-201ENST00000444401 332 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC073264.2-201ENST00000448886 166 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AL359385.1-201ENST00000456509 365 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AC063943.1-201ENST00000465434 453 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC114967.1-201ENST00000504890 259 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 HMGB1P29-201ENST00000505659 499 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 RNU6-528P-201ENST00000516926 100 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 HMGN1P28-201ENST00000521340 364 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AC124947.2-202ENST00000552735 133 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX6-1P78426 MTCYBP13-201ENST00000578634 1093 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 MIR4284-201ENST00000578924 81 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 COX6CP3-201ENST00000580869 223 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX6-1P78426 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AC068790.4-201ENST00000602474 263 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.4□□□□□ -1.71
NKX6-1P78426 AC004908.2-201ENST00000609090 574 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 OR6R2P-201ENST00000609216 300 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC068944.2-201ENST00000610373 403 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 TUG1_1.1-201ENST00000610654 145 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC006065.5-201ENST00000623427 349 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 MIR6863-201ENST00000636112 90 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 AC244517.1-201ENST00000606030 2086 ntBASIC4.4□□□□□ -1.71
NKX6-1P78426 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NKX6-1P78426 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NKX6-1P78426 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NKX6-1P78426 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NKX6-1P78426 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 MAPK10-286ENST00000641208 8747 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC079741.1-201ENST00000321498 212 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX6-1P78426 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NKX6-1P78426 RNU6-278P-201ENST00000390945 109 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 RPL17P50-201ENST00000396131 546 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 RNU2-62P-201ENST00000410868 191 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX6-1P78426 COX5BP7-201ENST00000414780 274 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX6-1P78426 CCDC58P2-201ENST00000417131 366 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX6-1P78426 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC019097.1-201ENST00000424783 735 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC133104.1-201ENST00000429100 218 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 MTCO2P3-201ENST00000442543 421 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 RPL34P20-201ENST00000442771 351 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC234775.1-201ENST00000454247 670 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 C1DP4-201ENST00000455429 424 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC108059.3-201ENST00000456388 214 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 MTCO2P29-201ENST00000465212 189 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC007182.2-201ENST00000489251 402 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 COX6B1P5-201ENST00000509843 249 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC016559.2-201ENST00000510759 359 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 RN7SKP46-201ENST00000515942 234 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX6-1P78426 MED28P5-201ENST00000528254 438 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX6-1P78426 PARP1P2-201ENST00000556806 195 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC040958.1-201ENST00000561102 201 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AL109618.2-201ENST00000605527 211 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AF250324.2-201ENST00000608299 610 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX6-1P78426 MIR6758-201ENST00000620653 63 ntBASIC4.39□□□□□ -1.71
NKX6-1P78426 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX6-1P78426 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX6-1P78426 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms