Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AL049780.3-201ENST00000624612 1583 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.46□□□□□ -1.86
CX3CL1P78423 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CL1P78423 OR11H5P-202ENST00000641612 1325 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC018555.1-201ENST00000567548 1980 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CL1P78423 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC244517.1-201ENST00000606030 2086 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 PABPC1P9-201ENST00000426076 1612 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.45□□□□□ -1.86
CX3CL1P78423 ELL2P3-201ENST00000457883 1602 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 AL133412.1-201ENST00000380194 2992 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 RNU6-769P-201ENST00000384407 104 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 MT-TH-201ENST00000387441 69 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 SNORA11F-201ENST00000408237 128 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 MIR1305-201ENST00000408300 86 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 RNU6-712P-201ENST00000410558 100 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 PGBD4P8-201ENST00000412993 562 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC009480.2-201ENST00000422916 432 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 EIF1P3-201ENST00000423841 334 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 FAR2P4-202ENST00000425399 584 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 DNAJC19P7-201ENST00000428811 344 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AL365184.2-201ENST00000431139 435 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AL512286.1-201ENST00000439244 400 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 EPS15P1-201ENST00000448836 336 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 RPL36AP33-201ENST00000450395 310 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 RPL23AP24-201ENST00000458203 385 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 snoU13.8-201ENST00000458890 104 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AP001025.2-201ENST00000490908 477 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AL024509.2-201ENST00000493462 493 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 PRELID3BP7-201ENST00000503606 469 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC021678.1-201ENST00000505195 936 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 RNU6-714P-201ENST00000516963 103 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 NDUFA5P2-201ENST00000519723 344 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC107016.1-201ENST00000550463 337 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC012669.1-201ENST00000603209 283 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AL358072.1-201ENST00000604156 575 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AL139286.1-201ENST00000604465 483 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 BCRP9-201ENST00000605312 388 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AL031775.1-201ENST00000607014 887 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC073530.2-201ENST00000623987 261 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CL1P78423 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.45□□□□□ -1.86
CX3CL1P78423 AC006378.2-201ENST00000623178 2476 ntBASIC3.45□□□□□ -1.86
CX3CL1P78423 AC139713.2-214ENST00000642059 1811 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC092447.10-201ENST00000620607 1652 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CL1P78423 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CX3CL1P78423 RNU5F-6P-201ENST00000362979 116 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 RNU6-335P-201ENST00000364563 113 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 RNU6-629P-201ENST00000384061 103 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 Y_RNA.548-201ENST00000384656 105 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC025750.1-201ENST00000399891 379 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC097374.1-203ENST00000400783 485 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 MTCO1P17-201ENST00000411522 491 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC109780.2-201ENST00000413467 845 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.44□□□□□ -1.86
CX3CL1P78423 RPS23P10-201ENST00000416185 486 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC244035.1-201ENST00000430042 390 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 RPS3AP54-201ENST00000435535 734 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC129850.1-201ENST00000436203 508 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC091862.1-201ENST00000438016 1100 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 OR6K1P-201ENST00000456766 971 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 RN7SL98P-201ENST00000462271 300 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC092754.2-201ENST00000463506 460 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms