Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 CENPUP2-201ENST00000555897 1186 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC090515.3-201ENST00000560431 315 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERVK_113P62684 PSMA6P4-201ENST00000603247 718 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC113403.1-201ENST00000604910 193 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AL590282.1-201ENST00000610379 1136 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 U6.101-201ENST00000637707 76 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERVK_113P62684 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.18□□□□□ -1.58
HERVK_113P62684 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.18□□□□□ -1.58
HERVK_113P62684 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERVK_113P62684 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 LINC00622-201ENST00000562811 1570 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AL022578.1-201ENST00000439330 1433 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 MIR383-201ENST00000362257 73 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 Y_RNA.70-201ENST00000362886 110 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 RNU6-797P-201ENST00000363101 109 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 SNORA72.1-201ENST00000363485 129 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 RNU6-769P-201ENST00000384407 104 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 RPL32P23-201ENST00000397237 405 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 DSTNP4-201ENST00000399472 474 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 CALM2P3-201ENST00000400429 449 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 RN7SKP266-201ENST00000410232 287 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 RNU6-195P-201ENST00000411352 109 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 USP9YP36-201ENST00000424581 829 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 ISCA1P6-201ENST00000427740 390 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AC023347.2-201ENST00000433994 462 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 ARPC3P1-201ENST00000437218 533 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 MTND5P14-201ENST00000441481 1267 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 MTND5P20-201ENST00000448677 143 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 FABP3P2-201ENST00000453169 399 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 MTND2P24-201ENST00000453434 806 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 MTCO3P2-201ENST00000457365 171 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 ADI1P3-201ENST00000549509 470 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AC233702.9-201ENST00000581528 203 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.17□□□□□ -1.58
HERVK_113P62684 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.17□□□□□ -1.58
HERVK_113P62684 AC078899.5-201ENST00000612475 178 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.17□□□□□ -1.58
HERVK_113P62684 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.17□□□□□ -1.58
HERVK_113P62684 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
HERVK_113P62684 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HERVK_113P62684 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.17□□□□□ -1.58
HERVK_113P62684 FARSBP1-201ENST00000435808 1778 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
HERVK_113P62684 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 MIR331-201ENST00000362302 94 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 RNU6-952P-201ENST00000391164 108 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 DHFRP6-201ENST00000401776 268 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 HMGB1P17-201ENST00000403495 628 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 RNU4-55P-201ENST00000410731 137 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AC009237.5-201ENST00000414271 501 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.16□□□□□ -1.58
HERVK_113P62684 AL139095.3-201ENST00000419672 1203 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.16□□□□□ -1.58
HERVK_113P62684 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HERVK_113P62684 AL445669.1-201ENST00000426743 755 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.16□□□□□ -1.58
HERVK_113P62684 NPM1P24-201ENST00000428039 894 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 RPL36P19-201ENST00000430744 301 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 FCF1P1-201ENST00000432690 571 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 MTND3P10-201ENST00000450967 341 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms