Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC007256.1-201ENST00000392253 2765 ntBASIC3.05□□□□□ -1.92
VSX2P58304 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VSX2P58304 OR1S2-201ENST00000302592 978 ntBASIC3.04□□□□□ -1.92
VSX2P58304 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VSX2P58304 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VSX2P58304 RPL31P2-201ENST00000413849 377 ntBASIC3.04□□□□□ -1.92
VSX2P58304 MTND2P16-201ENST00000419987 799 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AL121882.1-201ENST00000422893 417 ntBASIC3.04□□□□□ -1.92
VSX2P58304 PSMA2P3-201ENST00000429685 675 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC010881.1-201ENST00000433830 235 ntBASIC3.04□□□□□ -1.92
VSX2P58304 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.04□□□□□ -1.92
VSX2P58304 AL590399.6-201ENST00000446396 307 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC115115.1-201ENST00000449927 248 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.04□□□□□ -1.92
VSX2P58304 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.04□□□□□ -1.92
VSX2P58304 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
VSX2P58304 AC146507.1-201ENST00000468335 354 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC012181.1-201ENST00000479895 423 ntBASIC3.04□□□□□ -1.92
VSX2P58304 RPL21P47-201ENST00000483696 477 ntBASIC3.04□□□□□ -1.92
VSX2P58304 RPL31P13-201ENST00000484151 370 ntBASIC3.04□□□□□ -1.92
VSX2P58304 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.04□□□□□ -1.92
VSX2P58304 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.04□□□□□ -1.92
VSX2P58304 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.04□□□□□ -1.92
VSX2P58304 AC104027.1-201ENST00000521887 300 ntBASIC3.04□□□□□ -1.92
VSX2P58304 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
VSX2P58304 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VSX2P58304 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.04□□□□□ -1.92
VSX2P58304 TRAV37-201ENST00000553906 342 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC079148.1-201ENST00000565944 819 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.04□□□□□ -1.92
VSX2P58304 MIR5004-201ENST00000579078 107 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC012493.2-201ENST00000595083 291 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC005776.1-201ENST00000603164 290 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.04□□□□□ -1.92
VSX2P58304 MIR8057-201ENST00000620957 69 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC018692.3-201ENST00000623929 123 ntBASIC3.04□□□□□ -1.92
VSX2P58304 AC132825.7-201ENST00000638744 335 ntBASIC3.04□□□□□ -1.92
VSX2P58304 MTND5P3-201ENST00000438536 1800 ntBASIC3.04□□□□□ -1.92
VSX2P58304 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VSX2P58304 AL359893.1-201ENST00000447628 1580 ntBASIC3.04□□□□□ -1.92
VSX2P58304 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.03□□□□□ -1.92
VSX2P58304 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
VSX2P58304 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VSX2P58304 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VSX2P58304 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.03□□□□□ -1.92
VSX2P58304 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 MIR16-2-201ENST00000362117 81 ntBASIC3.03□□□□□ -1.92
VSX2P58304 RNA5SP374-201ENST00000362939 125 ntBASIC3.03□□□□□ -1.92
VSX2P58304 SNORD65C-201ENST00000390962 71 ntBASIC3.03□□□□□ -1.92
VSX2P58304 RPL23AP47-201ENST00000408017 460 ntBASIC3.03□□□□□ -1.92
VSX2P58304 UBE2V1P11-201ENST00000411559 285 ntBASIC3.03□□□□□ -1.92
VSX2P58304 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.03□□□□□ -1.92
VSX2P58304 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.03□□□□□ -1.92
VSX2P58304 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.03□□□□□ -1.92
VSX2P58304 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.03□□□□□ -1.92
VSX2P58304 AC104308.1-201ENST00000454621 333 ntBASIC3.03□□□□□ -1.92
VSX2P58304 RPS27AP1-201ENST00000475545 471 ntBASIC3.03□□□□□ -1.92
VSX2P58304 SETP6-201ENST00000479329 568 ntBASIC3.03□□□□□ -1.92
VSX2P58304 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.03□□□□□ -1.92
VSX2P58304 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.03□□□□□ -1.92
VSX2P58304 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.03□□□□□ -1.92
VSX2P58304 COL6A4P2-205ENST00000509855 506 ntBASIC3.03□□□□□ -1.92
VSX2P58304 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
VSX2P58304 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VSX2P58304 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.03□□□□□ -1.92
VSX2P58304 CENPUP2-201ENST00000555897 1186 ntBASIC3.03□□□□□ -1.92
VSX2P58304 MTCYBP28-201ENST00000566728 1132 ntBASIC3.03□□□□□ -1.92
VSX2P58304 AC095057.3-201ENST00000567102 1157 ntBASIC3.03□□□□□ -1.92
VSX2P58304 AC023824.3-201ENST00000569003 562 ntBASIC3.03□□□□□ -1.92
VSX2P58304 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 AC138932.5-201ENST00000617759 563 ntBASIC3.03□□□□□ -1.92
VSX2P58304 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VSX2P58304 AC073592.7-201ENST00000623659 507 ntBASIC3.03□□□□□ -1.92
VSX2P58304 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.03□□□□□ -1.92
VSX2P58304 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
VSX2P58304 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VSX2P58304 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VSX2P58304 AC025263.3-201ENST00000622965 1396 ntBASIC3.02□□□□□ -1.93
VSX2P58304 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.02□□□□□ -1.93
VSX2P58304 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VSX2P58304 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.02□□□□□ -1.93
VSX2P58304 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VSX2P58304 RNA5SP383-201ENST00000362934 120 ntBASIC3.02□□□□□ -1.93
VSX2P58304 NDUFB4P4-201ENST00000404822 243 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC007899.1-201ENST00000412776 775 ntBASIC3.02□□□□□ -1.93
VSX2P58304 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.02□□□□□ -1.93
VSX2P58304 TOMM22P1-201ENST00000418578 312 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC008173.1-201ENST00000418901 264 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 AL353705.1-201ENST00000433468 480 ntBASIC3.02□□□□□ -1.93
VSX2P58304 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms