Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LIM2P55344 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LIM2P55344 SNORA71.3-201ENST00000362582 128 ntBASIC3.2□□□□□ -1.9
LIM2P55344 RNA5SP197-201ENST00000363357 119 ntBASIC3.2□□□□□ -1.9
LIM2P55344 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 AC092634.6-201ENST00000418558 192 ntBASIC3.2□□□□□ -1.9
LIM2P55344 GLRXP1-201ENST00000423261 334 ntBASIC3.2□□□□□ -1.9
LIM2P55344 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.2□□□□□ -1.9
LIM2P55344 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 USP9YP22-201ENST00000438971 294 ntBASIC3.2□□□□□ -1.9
LIM2P55344 MTCO1P53-201ENST00000441633 699 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LIM2P55344 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.2□□□□□ -1.9
LIM2P55344 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 CYCSP35-201ENST00000451978 304 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC104073.1-201ENST00000451988 151 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 OR5H5P-201ENST00000503164 928 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC112198.1-201ENST00000505369 1220 ntBASIC3.2□□□□□ -1.9
LIM2P55344 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
LIM2P55344 DUXAP2-201ENST00000519198 589 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AP003385.6-201ENST00000531603 374 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 MIR3912-201ENST00000577566 105 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC006270.2-201ENST00000578523 652 ntBASIC3.2□□□□□ -1.9
LIM2P55344 MIR5708-201ENST00000579723 85 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC005412.1-201ENST00000580812 1049 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
LIM2P55344 AL390838.2-201ENST00000602394 274 ntBASIC3.2□□□□□ -1.9
LIM2P55344 GAS5-AS1-201ENST00000602767 694 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC113368.1-201ENST00000603736 382 ntBASIC3.2□□□□□ -1.9
LIM2P55344 IGHV3-29-201ENST00000604817 344 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AL138478.1-201ENST00000612252 832 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC015967.1-201ENST00000619893 476 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AL391262.2-201ENST00000622466 494 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC099654.9-201ENST00000637055 678 ntBASIC3.2□□□□□ -1.9
LIM2P55344 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 AC138649.5-201ENST00000637456 137 ntBASIC3.2□□□□□ -1.9
LIM2P55344 AC099654.8-201ENST00000637757 681 ntBASIC3.2□□□□□ -1.9
LIM2P55344 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.2□□□□□ -1.9
LIM2P55344 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LIM2P55344 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIM2P55344 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIM2P55344 RNU6-492P-201ENST00000363035 104 ntBASIC3.19□□□□□ -1.9
LIM2P55344 MIR183-201ENST00000384958 110 ntBASIC3.19□□□□□ -1.9
LIM2P55344 RPL31P1-201ENST00000398116 372 ntBASIC3.19□□□□□ -1.9
LIM2P55344 SNORA11-201ENST00000408789 128 ntBASIC3.19□□□□□ -1.9
LIM2P55344 RPS7P13-201ENST00000413955 498 ntBASIC3.19□□□□□ -1.9
LIM2P55344 HSFY4P-201ENST00000415994 1181 ntBASIC3.19□□□□□ -1.9
LIM2P55344 BOLA3P4-201ENST00000418151 400 ntBASIC3.19□□□□□ -1.9
LIM2P55344 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.19□□□□□ -1.9
LIM2P55344 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AL513174.1-201ENST00000423182 629 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.19□□□□□ -1.9
LIM2P55344 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AL159987.2-201ENST00000432754 307 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.19□□□□□ -1.9
LIM2P55344 MTCO1P48-201ENST00000448024 1096 ntBASIC3.19□□□□□ -1.9
LIM2P55344 snoU13.3-201ENST00000459441 104 ntBASIC3.19□□□□□ -1.9
LIM2P55344 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC010301.1-201ENST00000473936 355 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.19□□□□□ -1.9
LIM2P55344 AC106872.2-201ENST00000494303 480 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
LIM2P55344 RN7SKP116-201ENST00000516902 319 ntBASIC3.19□□□□□ -1.9
LIM2P55344 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC091163.3-201ENST00000518269 1144 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.19□□□□□ -1.9
LIM2P55344 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.19□□□□□ -1.9
LIM2P55344 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.19□□□□□ -1.9
LIM2P55344 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.19□□□□□ -1.9
LIM2P55344 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.19□□□□□ -1.9
LIM2P55344 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.19□□□□□ -1.9
LIM2P55344 SNORD39.3-201ENST00000584451 71 ntBASIC3.19□□□□□ -1.9
LIM2P55344 DPRXP5-201ENST00000604662 539 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.19□□□□□ -1.9
LIM2P55344 AC144521.1-201ENST00000607148 956 ntBASIC3.19□□□□□ -1.9
LIM2P55344 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.19□□□□□ -1.9
LIM2P55344 uc_338.32-201ENST00000615087 172 ntBASIC3.19□□□□□ -1.9
LIM2P55344 AC084824.4-201ENST00000620106 731 ntBASIC3.19□□□□□ -1.9
LIM2P55344 MIR6075-201ENST00000620782 95 ntBASIC3.19□□□□□ -1.9
LIM2P55344 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.19□□□□□ -1.9
LIM2P55344 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms