Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH11P55287 AC016769.3-201ENST00000396562 315 ntBASIC3.65□□□□□ -1.83
CDH11P55287 EIF5P1-201ENST00000400019 1231 ntBASIC3.65□□□□□ -1.83
CDH11P55287 HMGB1P17-201ENST00000403495 628 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 ISCA1P2-201ENST00000438679 421 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 BX276092.4-201ENST00000452056 248 ntBASIC3.65□□□□□ -1.83
CDH11P55287 RPS27AP8-201ENST00000452665 445 ntBASIC3.65□□□□□ -1.83
CDH11P55287 MTND3P7-201ENST00000474435 343 ntBASIC3.65□□□□□ -1.83
CDH11P55287 RPS3AP43-201ENST00000479743 781 ntBASIC3.65□□□□□ -1.83
CDH11P55287 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 AL132838.2-201ENST00000492041 314 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH11P55287 XKRY-201ENST00000510392 1100 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 AC099522.1-202ENST00000514718 367 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH11P55287 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 AC022968.1-201ENST00000567372 442 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 Z94722.1-201ENST00000604328 474 ntBASIC3.65□□□□□ -1.83
CDH11P55287 AC080013.6-201ENST00000606185 215 ntBASIC3.65□□□□□ -1.83
CDH11P55287 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH11P55287 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH11P55287 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 U6.101-201ENST00000637707 76 ntBASIC3.65□□□□□ -1.83
CDH11P55287 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH11P55287 AC011477.1-204ENST00000623416 1325 ntBASIC3.65□□□□□ -1.83
CDH11P55287 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH11P55287 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH11P55287 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 DDX43P2-201ENST00000604753 1354 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC087359.1-201ENST00000508335 1740 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC116667.1-201ENST00000604855 2072 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AL359893.1-201ENST00000447628 1580 ntBASIC3.64□□□□□ -1.83
CDH11P55287 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CDH11P55287 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH11P55287 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 XIAPP3-201ENST00000312918 795 ntBASIC3.64□□□□□ -1.83
CDH11P55287 RNU6-433P-201ENST00000363216 104 ntBASIC3.64□□□□□ -1.83
CDH11P55287 RNU1-64P-201ENST00000365443 163 ntBASIC3.64□□□□□ -1.83
CDH11P55287 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 SNORD116-1-201ENST00000384335 95 ntBASIC3.64□□□□□ -1.83
CDH11P55287 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH11P55287 SSXP10-201ENST00000402595 565 ntBASIC3.64□□□□□ -1.83
CDH11P55287 RN7SKP33-201ENST00000410942 340 ntBASIC3.64□□□□□ -1.83
CDH11P55287 OR8G2P-201ENST00000412796 908 ntBASIC3.64□□□□□ -1.83
CDH11P55287 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AC008065.1-201ENST00000428525 348 ntBASIC3.64□□□□□ -1.83
CDH11P55287 MTND1P20-201ENST00000430341 950 ntBASIC3.64□□□□□ -1.83
CDH11P55287 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH11P55287 KCTD9P3-201ENST00000434597 1169 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH11P55287 AC006011.1-201ENST00000442758 349 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AL500522.2-201ENST00000448562 343 ntBASIC3.64□□□□□ -1.83
CDH11P55287 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 USP9YP34-201ENST00000453983 808 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 PABPC1P3-201ENST00000469174 459 ntBASIC3.64□□□□□ -1.83
CDH11P55287 SETP11-201ENST00000473027 690 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH11P55287 AC108941.1-201ENST00000502853 530 ntBASIC3.64□□□□□ -1.83
CDH11P55287 TMEM251P1-201ENST00000503717 318 ntBASIC3.64□□□□□ -1.83
CDH11P55287 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CDH11P55287 AC005798.1-201ENST00000513715 387 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH11P55287 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AC092470.1-201ENST00000546187 132 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH11P55287 AL133457.1-201ENST00000564251 987 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH11P55287 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms