Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN3P54252 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN3P54252 HMGB1P5-201ENST00000255320 642 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AL391417.1-201ENST00000404100 426 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.67□□□□□ -1.82
ATXN3P54252 RPL30P2-201ENST00000414021 291 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.67□□□□□ -1.82
ATXN3P54252 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.67□□□□□ -1.82
ATXN3P54252 RPS20P24-201ENST00000457473 361 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 PABPC1P3-201ENST00000469174 459 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AC084024.2-201ENST00000503480 791 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN3P54252 AC004062.1-201ENST00000509926 645 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.67□□□□□ -1.82
ATXN3P54252 RN7SKP13-201ENST00000515933 244 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 RNA5SP468-201ENST00000516782 93 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 snoZ278.1-201ENST00000517059 112 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.67□□□□□ -1.82
ATXN3P54252 AC103843.2-201ENST00000530523 682 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AC092451.2-201ENST00000538746 658 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 SULT1C2P1-202ENST00000562418 459 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.67□□□□□ -1.82
ATXN3P54252 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.67□□□□□ -1.82
ATXN3P54252 AC090330.1-201ENST00000588646 764 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AC020914.6-201ENST00000594327 272 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 AL163642.2-201ENST00000604722 1019 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
ATXN3P54252 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.67□□□□□ -1.82
ATXN3P54252 AC026634.1-201ENST00000634369 198 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 ZNF663P-202ENST00000641770 1131 ntBASIC3.67□□□□□ -1.82
ATXN3P54252 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN3P54252 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN3P54252 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN3P54252 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 AC111188.2-201ENST00000529697 1387 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 MTND4P34-201ENST00000572715 1371 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 RNU5B-4P-201ENST00000363508 111 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 SNORD82-201ENST00000365530 70 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 OR6K3-202ENST00000368146 996 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 MIR490-201ENST00000384865 128 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.66□□□□□ -1.82
ATXN3P54252 RPL7P27-201ENST00000403775 720 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AL024474.1-201ENST00000404655 591 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.66□□□□□ -1.82
ATXN3P54252 AC007390.1-201ENST00000415722 356 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 MTCYBP32-201ENST00000427945 1084 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.66□□□□□ -1.82
ATXN3P54252 RPL31P54-201ENST00000429803 370 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 snoU13.4-201ENST00000458916 104 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC108078.3-201ENST00000502633 489 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC108941.1-201ENST00000502853 530 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC093767.1-201ENST00000504523 156 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 BOLA3P3-201ENST00000505182 232 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC016550.1-201ENST00000505348 785 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC026784.1-201ENST00000507986 352 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.66□□□□□ -1.82
ATXN3P54252 AC023632.1-201ENST00000518463 375 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
ATXN3P54252 AC019227.1-201ENST00000526902 510 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 OR5AP1P-201ENST00000529730 940 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AP001317.1-201ENST00000531194 960 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.66□□□□□ -1.82
ATXN3P54252 MTCYBP27-201ENST00000555160 670 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.66□□□□□ -1.82
ATXN3P54252 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 AC006116.10-201ENST00000591836 581 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.66□□□□□ -1.82
ATXN3P54252 AP005137.2-201ENST00000609238 400 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
ATXN3P54252 AC244517.1-201ENST00000606030 2086 ntBASIC3.66□□□□□ -1.82
ATXN3P54252 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN3P54252 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATXN3P54252 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATXN3P54252 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN3P54252 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN3P54252 DEFB109C-201ENST00000382575 264 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 DEFB109B-201ENST00000382656 264 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 SNORA48.2-201ENST00000390926 124 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN3P54252 SDCBPP2-201ENST00000424643 885 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 AC002075.2-201ENST00000425207 252 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 AL590103.1-201ENST00000434488 307 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.65□□□□□ -1.83
ATXN3P54252 SETP5-201ENST00000437270 562 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.65□□□□□ -1.83
ATXN3P54252 RPS29P31-201ENST00000446147 164 ntBASIC3.65□□□□□ -1.83
ATXN3P54252 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms