Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF144AP50876 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF144AP50876 PPIAP10-201ENST00000438675 458 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AC127537.2-201ENST00000439258 465 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 RPS3AP46-201ENST00000448352 682 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 NDUFB1P2-201ENST00000449477 176 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AC010733.1-201ENST00000451515 401 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 RANP2-201ENST00000456833 229 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF144AP50876 RNU6-1218P-201ENST00000458990 108 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 RPL21P103-201ENST00000479921 488 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF144AP50876 RNU6-347P-201ENST00000516658 105 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 Y_RNA.710-201ENST00000516975 110 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 RNA5SP400-201ENST00000517155 111 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 DEFB108D-201ENST00000527787 222 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF144AP50876 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.76□□□□□ -1.49
RNF144AP50876 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF144AP50876 MIR3157-201ENST00000578688 85 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF144AP50876 RPS29P30-201ENST00000600975 111 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AL390123.1-201ENST00000603216 237 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RNF144AP50876 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RNF144AP50876 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF144AP50876 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF144AP50876 AC133552.1-201ENST00000569988 4007 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 AC024651.2-201ENST00000562480 2098 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF144AP50876 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF144AP50876 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 AC138393.1-203ENST00000327086 343 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RNF144AP50876 Y_RNA.48-201ENST00000362710 103 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 Y_RNA.65-201ENST00000362846 100 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 RNA5SP391-201ENST00000363456 119 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 RNA5SP346-201ENST00000363541 121 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 RNU6-1243P-201ENST00000364028 107 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 GNG5P2-201ENST00000372054 207 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 RNU6-48P-201ENST00000384161 107 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 RPL21P24-201ENST00000413752 448 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 RPL21P50-201ENST00000417698 477 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 FAM183DP-201ENST00000421987 399 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF144AP50876 AC097359.1-201ENST00000447946 463 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 AL445991.1-201ENST00000450381 475 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 RN7SL393P-201ENST00000463588 296 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 AC018437.1-201ENST00000492214 406 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RNF144AP50876 RNU6-255P-201ENST00000516957 105 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 AC139365.2-201ENST00000517972 253 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF144AP50876 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF144AP50876 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.75□□□□□ -1.49
RNF144AP50876 AC063949.1-201ENST00000552900 865 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF144AP50876 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF144AP50876 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 NANOGP3-201ENST00000605855 286 ntBASIC5.75□□□□□ -1.49
RNF144AP50876 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF144AP50876 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF144AP50876 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.75□□□□□ -1.49
RNF144AP50876 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF144AP50876 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
RNF144AP50876 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RNF144AP50876 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF144AP50876 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF144AP50876 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF144AP50876 SAMMSON-213ENST00000641336 1521 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF144AP50876 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RNF144AP50876 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF144AP50876 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF144AP50876 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RNF144AP50876 AC027575.3-201ENST00000583058 2747 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF144AP50876 RNA5SP375-201ENST00000362975 119 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 PRELID1P1-201ENST00000403549 660 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 RNU2-25P-201ENST00000411041 191 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF144AP50876 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF144AP50876 AL133396.1-201ENST00000432048 687 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 AP000936.3-201ENST00000438127 255 ntBASIC5.74□□□□□ -1.49
RNF144AP50876 Z95327.1-201ENST00000446082 482 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms