Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA1P49639 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA1P49639 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA1P49639 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA1P49639 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA1P49639 RPS20P21-201ENST00000466859 343 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 RN7SL329P-201ENST00000467740 299 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 PABPC1P3-201ENST00000469174 459 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 AC078785.3-201ENST00000476607 425 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA1P49639 AP000797.1-201ENST00000478870 387 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA1P49639 RPL23AP72-201ENST00000492447 435 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 AC008953.1-201ENST00000497334 318 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA1P49639 AC104057.1-201ENST00000515547 497 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 RN7SKP277-201ENST00000516895 283 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 IGKV1-32-201ENST00000519290 311 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA1P49639 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA1P49639 AC092470.1-201ENST00000546187 132 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXA1P49639 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 HSPE1P3-201ENST00000559254 309 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA1P49639 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA1P49639 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXA1P49639 AC104785.1-201ENST00000603220 588 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA1P49639 AC087752.4-201ENST00000605911 462 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 AC104073.3-201ENST00000610942 955 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 MIR7155-201ENST00000615925 56 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 MIR6853-201ENST00000619642 74 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HOXA1P49639 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA1P49639 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA1P49639 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA1P49639 SDAD1P1-202ENST00000524156 2051 ntBASIC3.59□□□□□ -1.83
HOXA1P49639 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.59□□□□□ -1.84
HOXA1P49639 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HOXA1P49639 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.59□□□□□ -1.84
HOXA1P49639 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 RNA5SP307-201ENST00000362863 116 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 RNU6-1119P-201ENST00000384349 108 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 ENSAP1-201ENST00000392855 326 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL645927.1-201ENST00000396783 406 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL024474.1-201ENST00000404655 591 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 MIR320C1-201ENST00000408566 88 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RNA5SP113-201ENST00000410486 84 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 Y_RNA.599-201ENST00000410489 109 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RPS20P14-201ENST00000412545 360 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 TPMTP2-201ENST00000414372 726 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 CDK8P2-201ENST00000415020 547 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RPL36AP36-201ENST00000418616 301 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RAD23BP1-201ENST00000421404 1227 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 BX510359.3-201ENST00000422168 306 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC096638.2-201ENST00000434965 711 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL356276.2-201ENST00000435919 558 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL031667.1-201ENST00000440222 725 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RPL23AP93-201ENST00000440847 484 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL022238.1-201ENST00000442557 355 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RPL36AP15-201ENST00000444514 266 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC002381.1-201ENST00000447049 280 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC012671.1-201ENST00000451912 203 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 DNAJC19P1-201ENST00000455312 319 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA1P49639 RPS27AP17-201ENST00000463344 455 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RN7SL585P-201ENST00000470538 280 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RPL31P50-201ENST00000471002 296 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC004453.1-201ENST00000487895 408 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC093767.1-201ENST00000504523 156 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC025554.1-201ENST00000505641 188 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA1P49639 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC007016.1-201ENST00000512110 244 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC116347.2-201ENST00000514912 523 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 AP002963.1-201ENST00000530590 184 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC105129.1-201ENST00000560250 297 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC009117.1-201ENST00000563948 554 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms