Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
LHX1P48742 AC008083.4-201ENST00000615076 444 ntBASIC3.82□□□□□ -1.8
LHX1P48742 AP002782.1-201ENST00000623107 614 ntBASIC3.82□□□□□ -1.8
LHX1P48742 AL359715.5-201ENST00000623431 443 ntBASIC3.82□□□□□ -1.8
LHX1P48742 AC120349.2-201ENST00000625002 298 ntBASIC3.82□□□□□ -1.8
LHX1P48742 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
LHX1P48742 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
LHX1P48742 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 SEPT7P7-201ENST00000420492 1301 ntBASIC3.81□□□□□ -1.8
LHX1P48742 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LHX1P48742 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 RNU6-216P-201ENST00000363282 104 ntBASIC3.81□□□□□ -1.8
LHX1P48742 RNVU1-3-201ENST00000364313 161 ntBASIC3.81□□□□□ -1.8
LHX1P48742 SNORA51.6-201ENST00000384151 125 ntBASIC3.81□□□□□ -1.8
LHX1P48742 TAF9BP1-201ENST00000396646 746 ntBASIC3.81□□□□□ -1.8
LHX1P48742 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
LHX1P48742 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 HIGD1AP15-201ENST00000416198 280 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.81□□□□□ -1.8
LHX1P48742 AC093698.1-201ENST00000423843 571 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AL035410.1-201ENST00000427409 427 ntBASIC3.81□□□□□ -1.8
LHX1P48742 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.81□□□□□ -1.8
LHX1P48742 ATP5F1P1-201ENST00000433775 569 ntBASIC3.81□□□□□ -1.8
LHX1P48742 MRPS18BP2-201ENST00000434310 759 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC073063.1-201ENST00000434352 607 ntBASIC3.81□□□□□ -1.8
LHX1P48742 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX1P48742 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 COX7BP2-201ENST00000437976 242 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AF228730.2-201ENST00000438784 848 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 VN1R10P-201ENST00000447106 875 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC004022.1-201ENST00000447766 1066 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 RPL21P134-201ENST00000453468 483 ntBASIC3.81□□□□□ -1.8
LHX1P48742 MTCO3P20-201ENST00000454926 688 ntBASIC3.81□□□□□ -1.8
LHX1P48742 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.81□□□□□ -1.8
LHX1P48742 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX1P48742 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX1P48742 AC023598.1-201ENST00000472521 361 ntBASIC3.81□□□□□ -1.8
LHX1P48742 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 AC091951.3-201ENST00000504093 246 ntBASIC3.81□□□□□ -1.8
LHX1P48742 WBP1LP4-201ENST00000505043 344 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC109445.1-201ENST00000512356 383 ntBASIC3.81□□□□□ -1.8
LHX1P48742 RNU4-60P-201ENST00000517239 135 ntBASIC3.81□□□□□ -1.8
LHX1P48742 IGKV2D-36-201ENST00000518643 226 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 MTCO2P15-201ENST00000532655 656 ntBASIC3.81□□□□□ -1.8
LHX1P48742 HIGD1AP17-201ENST00000554576 276 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC007424.1-203ENST00000554613 687 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.81□□□□□ -1.8
LHX1P48742 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX1P48742 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.81□□□□□ -1.8
LHX1P48742 BNIP3P38-201ENST00000601117 544 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC022022.2-201ENST00000602989 360 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AL159169.3-201ENST00000608871 561 ntBASIC3.81□□□□□ -1.8
LHX1P48742 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.81□□□□□ -1.8
LHX1P48742 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AL354976.1-201ENST00000613843 387 ntBASIC3.81□□□□□ -1.8
LHX1P48742 AC006927.4-201ENST00000639187 543 ntBASIC3.81□□□□□ -1.8
LHX1P48742 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX1P48742 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 MTND5P3-201ENST00000438536 1800 ntBASIC3.81□□□□□ -1.8
LHX1P48742 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX1P48742 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX1P48742 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX1P48742 AC027287.1-201ENST00000553115 1453 ntBASIC3.8□□□□□ -1.8
LHX1P48742 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX1P48742 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX1P48742 RN7SKP44-201ENST00000363602 316 ntBASIC3.8□□□□□ -1.8
LHX1P48742 MT-TC-201ENST00000387405 66 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LHX1P48742 AL024474.1-201ENST00000404655 591 ntBASIC3.8□□□□□ -1.8
LHX1P48742 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
LHX1P48742 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 AC006989.1-201ENST00000427212 131 ntBASIC3.8□□□□□ -1.8
LHX1P48742 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.8□□□□□ -1.8
LHX1P48742 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 ANP32BP2-201ENST00000454525 545 ntBASIC3.8□□□□□ -1.8
LHX1P48742 MTND1P16-201ENST00000465177 898 ntBASIC3.8□□□□□ -1.8
LHX1P48742 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.8□□□□□ -1.8
LHX1P48742 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 S100A11P1-201ENST00000477525 312 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 AC092045.1-201ENST00000495716 1231 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms