Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 BTF3P5-201ENST00000457252 467 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 RN7SL594P-201ENST00000470590 287 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC013828.1-201ENST00000481845 158 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 GTF2IP9-201ENST00000502460 301 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 KLRA1P-201ENST00000503499 986 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC096571.1-202ENST00000506634 735 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 RNU2-58P-201ENST00000516403 183 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AP000889.1-201ENST00000530968 660 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 MIR4509-3-201ENST00000578671 94 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 MIR4509-2-201ENST00000583920 94 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 MIR4509-1-201ENST00000618224 94 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC009318.4-201ENST00000620496 486 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC023510.2-201ENST00000622162 746 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 OR1S1-201ENST00000624470 978 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFRSF4P43489 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 AL133383.2-201ENST00000622958 2336 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFRSF4P43489 AC007656.2-201ENST00000624902 4547 ntBASIC3.54□□□□□ -1.84
TNFRSF4P43489 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TNFRSF4P43489 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 RNU5E-10P-201ENST00000363506 118 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 SNORD65.1-201ENST00000390889 71 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 NDUFB4P4-201ENST00000404822 243 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 RNU2-28P-201ENST00000410457 189 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 VN1R51P-201ENST00000411675 945 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 RAC1P8-201ENST00000427086 527 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 RPL21P112-201ENST00000434403 463 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC004854.1-201ENST00000440356 349 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AL353748.1-201ENST00000440753 474 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC079776.3-201ENST00000450665 370 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 PNPLA4P1-201ENST00000458328 305 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 RPS29P2-201ENST00000479278 136 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 UBE2V1P12-201ENST00000503954 474 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 FCF1P8-201ENST00000510322 597 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC010342.1-201ENST00000514047 877 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 MYL12AP1-201ENST00000518490 515 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC027309.2-201ENST00000520566 192 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 AL049838.1-201ENST00000563647 981 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 AL355816.2-201ENST00000610049 647 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC009237.15-201ENST00000610252 501 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AL050303.3-201ENST00000613704 284 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 AC123767.1-202ENST00000620407 817 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 MIR8057-201ENST00000620957 69 ntBASIC3.53□□□□□ -1.84
TNFRSF4P43489 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFRSF4P43489 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TNFRSF4P43489 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
TNFRSF4P43489 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.85
TNFRSF4P43489 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.85
TNFRSF4P43489 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFRSF4P43489 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFRSF4P43489 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFRSF4P43489 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFRSF4P43489 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AP000568.1-201ENST00000282964 442 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 MIR448-201ENST00000362131 111 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 SNORA31-201ENST00000362607 130 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 RNU4-51P-201ENST00000364206 140 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 SNORA7.2-201ENST00000364446 145 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 SNORD82-201ENST00000365530 70 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 RNU6-730P-201ENST00000383954 104 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 RPL31P1-201ENST00000398116 372 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 MTND4LP20-201ENST00000402379 270 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AL024474.1-201ENST00000404655 591 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AL449283.1-202ENST00000418249 604 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 OR2X1P-201ENST00000421144 687 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms