Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 C1DP4-201ENST00000455429 424 ntBASIC4.81□□□□□ -1.64
XPAP23025 RPS20P32-201ENST00000456044 356 ntBASIC4.81□□□□□ -1.64
XPAP23025 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.81□□□□□ -1.64
XPAP23025 AC090686.1-201ENST00000481577 749 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC011005.3-201ENST00000491624 395 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC114967.1-201ENST00000504890 259 ntBASIC4.81□□□□□ -1.64
XPAP23025 HMGB1P29-201ENST00000505659 499 ntBASIC4.81□□□□□ -1.64
XPAP23025 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.81□□□□□ -1.64
XPAP23025 AC091868.1-201ENST00000508746 304 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC074344.1-201ENST00000512823 224 ntBASIC4.81□□□□□ -1.64
XPAP23025 Y_RNA.704-201ENST00000516851 102 ntBASIC4.81□□□□□ -1.64
XPAP23025 RNA5SP392-201ENST00000516905 112 ntBASIC4.81□□□□□ -1.64
XPAP23025 IGKV1-32-201ENST00000519290 311 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.81□□□□□ -1.64
XPAP23025 AL121579.1-201ENST00000555129 305 ntBASIC4.81□□□□□ -1.64
XPAP23025 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.81□□□□□ -1.64
XPAP23025 AC124068.1-201ENST00000563131 678 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC107954.1-201ENST00000565906 727 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC009101.1-201ENST00000568135 242 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.81□□□□□ -1.64
XPAP23025 AL353997.4-201ENST00000586196 166 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.81□□□□□ -1.64
XPAP23025 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.81□□□□□ -1.64
XPAP23025 AC011451.2-201ENST00000604303 598 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC010680.4-201ENST00000605334 543 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC055876.5-201ENST00000605667 259 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC011816.2-201ENST00000607089 556 ntBASIC4.81□□□□□ -1.64
XPAP23025 RNU6-87P-201ENST00000607561 108 ntBASIC4.81□□□□□ -1.64
XPAP23025 AC104458.1-201ENST00000608243 463 ntBASIC4.81□□□□□ -1.64
XPAP23025 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.81□□□□□ -1.64
XPAP23025 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
XPAP23025 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.81□□□□□ -1.64
XPAP23025 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.81□□□□□ -1.64
XPAP23025 AC019226.1-201ENST00000625666 515 ntBASIC4.81□□□□□ -1.64
XPAP23025 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPAP23025 AC092125.1-201ENST00000562568 1995 ntBASIC4.81□□□□□ -1.64
XPAP23025 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPAP23025 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPAP23025 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.81□□□□□ -1.64
XPAP23025 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.81□□□□□ -1.64
XPAP23025 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.8□□□□□ -1.64
XPAP23025 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
XPAP23025 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.8□□□□□ -1.64
XPAP23025 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
XPAP23025 RNU6-282P-201ENST00000365357 103 ntBASIC4.8□□□□□ -1.64
XPAP23025 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
XPAP23025 RNU6-730P-201ENST00000383954 104 ntBASIC4.8□□□□□ -1.64
XPAP23025 RPS16P5-201ENST00000406501 404 ntBASIC4.8□□□□□ -1.64
XPAP23025 CTSL3P-202ENST00000412179 788 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.8□□□□□ -1.64
XPAP23025 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 MTCO2P19-201ENST00000427513 598 ntBASIC4.8□□□□□ -1.64
XPAP23025 PSMA6P3-201ENST00000428242 164 ntBASIC4.8□□□□□ -1.64
XPAP23025 NANOGP6-201ENST00000429190 847 ntBASIC4.8□□□□□ -1.64
XPAP23025 MTCO2P11-201ENST00000431069 680 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC005154.2-201ENST00000438110 379 ntBASIC4.8□□□□□ -1.64
XPAP23025 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.8□□□□□ -1.64
XPAP23025 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.8□□□□□ -1.64
XPAP23025 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 RNA5SP103-201ENST00000459503 118 ntBASIC4.8□□□□□ -1.64
XPAP23025 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.8□□□□□ -1.64
XPAP23025 RPS29P22-201ENST00000472363 168 ntBASIC4.8□□□□□ -1.64
XPAP23025 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.8□□□□□ -1.64
XPAP23025 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 AC105914.1-201ENST00000511798 226 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.8□□□□□ -1.64
XPAP23025 RNA5SP249-201ENST00000516127 99 ntBASIC4.8□□□□□ -1.64
XPAP23025 RNU6-201P-201ENST00000517100 61 ntBASIC4.8□□□□□ -1.64
XPAP23025 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 DEFB109D-201ENST00000529497 240 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC005868.1-201ENST00000536421 331 ntBASIC4.8□□□□□ -1.64
XPAP23025 MIR5699-201ENST00000578903 90 ntBASIC4.8□□□□□ -1.64
XPAP23025 RN7SL52P-201ENST00000584271 284 ntBASIC4.8□□□□□ -1.64
XPAP23025 NRBF2P1-201ENST00000587407 859 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.8□□□□□ -1.64
XPAP23025 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.8□□□□□ -1.64
XPAP23025 AL391646.1-201ENST00000603860 190 ntBASIC4.8□□□□□ -1.64
XPAP23025 LARP7P1-201ENST00000605576 316 ntBASIC4.8□□□□□ -1.64
XPAP23025 OR10AB1P-201ENST00000609613 938 ntBASIC4.8□□□□□ -1.64
XPAP23025 AL590282.1-201ENST00000610379 1136 ntBASIC4.8□□□□□ -1.64
XPAP23025 RN7SL722P-201ENST00000617780 284 ntBASIC4.8□□□□□ -1.64
XPAP23025 RN7SL565P-201ENST00000618246 284 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC009159.1-201ENST00000618386 642 ntBASIC4.8□□□□□ -1.64
XPAP23025 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.8□□□□□ -1.64
XPAP23025 AC011755.1-201ENST00000623763 2049 ntBASIC4.8□□□□□ -1.64
XPAP23025 AC012618.3-205ENST00000637896 1496 ntBASIC4.8□□□□□ -1.64
XPAP23025 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
XPAP23025 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPAP23025 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.79□□□□□ -1.64
XPAP23025 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms