Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR764-201ENST00000390811 85 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 RNA5SP105-201ENST00000391123 113 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 GSTA12P-201ENST00000402398 508 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 NDUFB4P5-201ENST00000415445 361 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 AC244505.4-201ENST00000434905 287 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
COL11A1P12107 SSXP5-201ENST00000443473 287 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.81□□□□□ -1.96
COL11A1P12107 OR5H5P-201ENST00000503164 928 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 ACTR6P1-201ENST00000514311 1104 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 RN7SKP24-201ENST00000515888 284 ntBASIC2.81□□□□□ -1.96
COL11A1P12107 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.81□□□□□ -1.96
COL11A1P12107 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.81□□□□□ -1.96
COL11A1P12107 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
COL11A1P12107 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL11A1P12107 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL11A1P12107 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
COL11A1P12107 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
COL11A1P12107 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
COL11A1P12107 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
COL11A1P12107 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
COL11A1P12107 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL11A1P12107 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
COL11A1P12107 RNU6-304P-201ENST00000364855 107 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 RPS20P25-201ENST00000412447 352 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 AC092013.1-201ENST00000438795 332 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.8□□□□□ -1.96
COL11A1P12107 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.8□□□□□ -1.96
COL11A1P12107 AP002371.1-201ENST00000463604 433 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 AC234781.5-201ENST00000508429 271 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 AC006445.2-201ENST00000510061 472 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 OR4H12P-201ENST00000556269 907 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.8□□□□□ -1.96
COL11A1P12107 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.8□□□□□ -1.96
COL11A1P12107 AL162233.1-201ENST00000620014 944 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL11A1P12107 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
COL11A1P12107 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.8□□□□□ -1.96
COL11A1P12107 AC097714.1-201ENST00000511272 1647 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 AC009487.4-201ENST00000624969 3585 ntBASIC2.8□□□□□ -1.96
COL11A1P12107 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 OR51A3P-201ENST00000413596 924 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 MTND2P2-201ENST00000434633 945 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.79□□□□□ -1.96
COL11A1P12107 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.79□□□□□ -1.96
COL11A1P12107 AC092185.1-201ENST00000491371 97 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC092045.1-201ENST00000495716 1231 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 TRAV37-201ENST00000553906 342 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC068313.1-201ENST00000604028 1008 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
COL11A1P12107 AL021368.2-201ENST00000606125 5352 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL11A1P12107 AC123912.3-201ENST00000600907 1367 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AL162578.1-201ENST00000406202 378 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC099336.2-201ENST00000422457 254 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 MTATP6P11-201ENST00000428071 670 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 HMGB1P18-201ENST00000438801 619 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 RPL23AP23-201ENST00000452590 471 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 OR4G11P-201ENST00000492842 939 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC008565.1-201ENST00000509046 885 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC026436.1-201ENST00000510537 270 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.79□□□□□ -1.96
COL11A1P12107 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL11A1P12107 ADAM3B-201ENST00000569937 840 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.79□□□□□ -1.96
COL11A1P12107 AC025754.2-201ENST00000606491 432 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL11A1P12107 AL136964.1-201ENST00000622038 2990 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 AC092079.1-201ENST00000558620 1985 ntBASIC2.79□□□□□ -1.96
COL11A1P12107 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.79□□□□□ -1.96
COL11A1P12107 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
COL11A1P12107 GAPDHP27-201ENST00000447427 1020 ntBASIC2.78□□□□□ -1.96
COL11A1P12107 snoU13.23-201ENST00000458863 104 ntBASIC2.78□□□□□ -1.96
COL11A1P12107 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.78□□□□□ -1.96
COL11A1P12107 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.78□□□□□ -1.96
COL11A1P12107 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.78□□□□□ -1.96
COL11A1P12107 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.78□□□□□ -1.96
COL11A1P12107 AC061975.8-201ENST00000587058 721 ntBASIC2.78□□□□□ -1.96
COL11A1P12107 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.78□□□□□ -1.96
COL11A1P12107 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.78□□□□□ -1.96
COL11A1P12107 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL11A1P12107 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL11A1P12107 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms