Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.36□□□□□ -2.03
FREM3P0C091 AC116096.1-201ENST00000566804 2314 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.36□□□□□ -2.03
FREM3P0C091 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
FREM3P0C091 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FREM3P0C091 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FREM3P0C091 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FREM3P0C091 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FREM3P0C091 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FREM3P0C091 FAT1P1-201ENST00000406588 507 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AC063976.3-201ENST00000426849 329 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 MTATP6P11-201ENST00000428071 670 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AP000873.1-201ENST00000463987 400 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.35□□□□□ -2.03
FREM3P0C091 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC079089.3-201ENST00000603094 673 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AC107294.1-201ENST00000609524 467 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 RMST_5.1-201ENST00000618704 126 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
FREM3P0C091 MIR4278-201ENST00000636094 69 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 U6.98-201ENST00000637157 84 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
FREM3P0C091 SYT14P1-202ENST00000600441 1448 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 GABPAP-201ENST00000419271 1356 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 SAR1AP4-201ENST00000429225 591 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AL606490.7-201ENST00000433136 191 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
FREM3P0C091 RPL36AP6-201ENST00000435770 321 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AL138799.3-201ENST00000438968 350 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AL590399.6-201ENST00000446396 307 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 SLC31A1P1-201ENST00000451221 567 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 RPS20P32-201ENST00000456044 356 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC093663.2-201ENST00000484625 313 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AC093755.1-201ENST00000512950 1023 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC007687.1-201ENST00000602704 304 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.35□□□□□ -2.03
FREM3P0C091 AC099778.2-201ENST00000610904 211 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 AC092326.2-201ENST00000624772 1561 ntBASIC2.35□□□□□ -2.03
FREM3P0C091 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.35□□□□□ -2.03
FREM3P0C091 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
FREM3P0C091 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
FREM3P0C091 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
FREM3P0C091 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
FREM3P0C091 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
FREM3P0C091 AL672167.1-206ENST00000356293 943 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
FREM3P0C091 SNORA31-201ENST00000362607 130 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 RNA5SP167-201ENST00000365461 116 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 MIR320B1-201ENST00000390209 79 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 RNA5SP210-201ENST00000391034 120 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.34□□□□□ -2.03
FREM3P0C091 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.34□□□□□ -2.03
FREM3P0C091 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.34□□□□□ -2.03
FREM3P0C091 RPL29P29-201ENST00000448725 423 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 RPL31P13-201ENST00000484151 370 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.34□□□□□ -2.03
FREM3P0C091 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.34□□□□□ -2.03
FREM3P0C091 MIR4506-201ENST00000584693 77 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.34□□□□□ -2.03
FREM3P0C091 LLPHP1-201ENST00000603571 367 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 AC026790.2-201ENST00000606282 430 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.34□□□□□ -2.03
FREM3P0C091 IGHVIII-44-202ENST00000636235 289 ntBASIC2.34□□□□□ -2.03
FREM3P0C091 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
FREM3P0C091 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
FREM3P0C091 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
FREM3P0C091 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.34□□□□□ -2.04
FREM3P0C091 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
FREM3P0C091 SNORD65-201ENST00000391079 73 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 MRPL50P4-201ENST00000446432 475 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 MTCO1P30-201ENST00000515244 580 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.33□□□□□ -2.04
FREM3P0C091 AP001207.1-201ENST00000524051 481 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 AC007536.1-201ENST00000533382 349 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 AC007620.3-201ENST00000608131 497 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 CTSLP2-204ENST00000629029 392 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.33□□□□□ -2.04
FREM3P0C091 SAGE4P-201ENST00000442271 3381 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms