Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC092474.3-201ENST00000603022 568 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC105227.2-201ENST00000615075 605 ntBASIC3.31□□□□□ -1.88
TPM1P09493 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TPM1P09493 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM1P09493 AC092650.2-201ENST00000619984 902 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC091046.2-201ENST00000620775 665 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC022509.4-201ENST00000621404 572 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
TPM1P09493 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TPM1P09493 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM1P09493 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM1P09493 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
TPM1P09493 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
TPM1P09493 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TPM1P09493 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM1P09493 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TPM1P09493 AL136520.1-201ENST00000600311 1322 ntBASIC3.3□□□□□ -1.88
TPM1P09493 MIR554-201ENST00000384874 96 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM1P09493 UBE2D3P2-201ENST00000424409 445 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM1P09493 UBE2V1P5-201ENST00000440070 405 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AC104472.2-201ENST00000469035 601 ntBASIC3.3□□□□□ -1.88
TPM1P09493 RPS17P11-201ENST00000474297 293 ntBASIC3.3□□□□□ -1.88
TPM1P09493 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM1P09493 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM1P09493 AC098799.2-201ENST00000509466 868 ntBASIC3.3□□□□□ -1.88
TPM1P09493 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM1P09493 AC104057.1-201ENST00000515547 497 ntBASIC3.3□□□□□ -1.88
TPM1P09493 SNORA31.1-201ENST00000515993 133 ntBASIC3.3□□□□□ -1.88
TPM1P09493 SNORA31.5-201ENST00000516190 133 ntBASIC3.3□□□□□ -1.88
TPM1P09493 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
TPM1P09493 OR5G4P-201ENST00000525251 760 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.3□□□□□ -1.88
TPM1P09493 RPL21P12-201ENST00000559810 515 ntBASIC3.3□□□□□ -1.88
TPM1P09493 ZNF415P1-201ENST00000582279 1166 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.3□□□□□ -1.88
TPM1P09493 AL136295.6-201ENST00000610486 658 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM1P09493 AC097372.4-201ENST00000625025 466 ntBASIC3.3□□□□□ -1.88
TPM1P09493 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TPM1P09493 MIR622-201ENST00000638396 96 ntBASIC3.3□□□□□ -1.88
TPM1P09493 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM1P09493 AC009487.2-201ENST00000420969 6821 ntBASIC3.3□□□□□ -1.88
TPM1P09493 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TPM1P09493 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TPM1P09493 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TPM1P09493 RNA5SP515-201ENST00000364570 118 ntBASIC3.29□□□□□ -1.88
TPM1P09493 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
TPM1P09493 RNU6-339P-201ENST00000384310 107 ntBASIC3.29□□□□□ -1.88
TPM1P09493 RNU6-1226P-201ENST00000384317 107 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AC016769.2-201ENST00000414815 475 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM1P09493 USP9YP36-201ENST00000424581 829 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AC006548.1-201ENST00000427470 102 ntBASIC3.29□□□□□ -1.88
TPM1P09493 UBE2V1P6-201ENST00000430840 422 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 AC016696.1-201ENST00000446949 318 ntBASIC3.29□□□□□ -1.88
TPM1P09493 OR6K1P-201ENST00000456766 971 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 RN7SL863P-201ENST00000462370 296 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AC103987.1-201ENST00000473394 348 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
TPM1P09493 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
TPM1P09493 PRELID3BP6-201ENST00000503839 571 ntBASIC3.29□□□□□ -1.88
TPM1P09493 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.29□□□□□ -1.88
TPM1P09493 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM1P09493 AC008565.1-201ENST00000509046 885 ntBASIC3.29□□□□□ -1.88
TPM1P09493 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.29□□□□□ -1.88
TPM1P09493 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.29□□□□□ -1.88
TPM1P09493 RNU6-826P-201ENST00000516827 104 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.29□□□□□ -1.88
TPM1P09493 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.29□□□□□ -1.88
TPM1P09493 AL121603.1-201ENST00000553815 142 ntBASIC3.29□□□□□ -1.88
TPM1P09493 NCAPGP2-201ENST00000557911 754 ntBASIC3.29□□□□□ -1.88
TPM1P09493 AC087481.2-201ENST00000565492 330 ntBASIC3.29□□□□□ -1.88
TPM1P09493 COX6CP3-201ENST00000580869 223 ntBASIC3.29□□□□□ -1.88
TPM1P09493 MIR3922-201ENST00000585192 84 ntBASIC3.29□□□□□ -1.88
TPM1P09493 CCDC58P3-201ENST00000590792 430 ntBASIC3.29□□□□□ -1.88
TPM1P09493 XIAPP1-201ENST00000603162 600 ntBASIC3.29□□□□□ -1.88
TPM1P09493 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 AC002076.2-201ENST00000617362 122 ntBASIC3.29□□□□□ -1.88
TPM1P09493 STMN1P1-201ENST00000617809 440 ntBASIC3.29□□□□□ -1.88
TPM1P09493 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.29□□□□□ -1.88
TPM1P09493 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 AC090617.7-201ENST00000623952 126 ntBASIC3.29□□□□□ -1.88
TPM1P09493 CR381572.1-201ENST00000625098 102 ntBASIC3.29□□□□□ -1.88
TPM1P09493 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.29□□□□□ -1.88
TPM1P09493 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM1P09493 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TPM1P09493 RNU6-543P-201ENST00000362576 108 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RNA5SP258-201ENST00000362750 119 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
TPM1P09493 SNORD67-201ENST00000390833 111 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms