Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TIMM9P2-201ENST00000419324 266 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.24□□□□□ -1.73
MMP3P08254 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 MTND1P20-201ENST00000430341 950 ntBASIC4.24□□□□□ -1.73
MMP3P08254 USP9YP35-201ENST00000435696 412 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.24□□□□□ -1.73
MMP3P08254 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.24□□□□□ -1.73
MMP3P08254 AP000936.2-201ENST00000447151 681 ntBASIC4.24□□□□□ -1.73
MMP3P08254 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
MMP3P08254 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 ARPC3P2-201ENST00000457786 533 ntBASIC4.24□□□□□ -1.73
MMP3P08254 TPTE2P5-203ENST00000458118 728 ntBASIC4.24□□□□□ -1.73
MMP3P08254 RPS6P4-201ENST00000494693 758 ntBASIC4.24□□□□□ -1.73
MMP3P08254 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.24□□□□□ -1.73
MMP3P08254 AC091435.1-201ENST00000505442 584 ntBASIC4.24□□□□□ -1.73
MMP3P08254 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.24□□□□□ -1.73
MMP3P08254 MTCYBP43-201ENST00000513621 740 ntBASIC4.24□□□□□ -1.73
MMP3P08254 RN7SKP18-201ENST00000516005 275 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.24□□□□□ -1.73
MMP3P08254 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.24□□□□□ -1.73
MMP3P08254 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
MMP3P08254 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.24□□□□□ -1.73
MMP3P08254 MTND6P33-201ENST00000571794 183 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AC005951.1-201ENST00000576706 485 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.24□□□□□ -1.73
MMP3P08254 U3.45-201ENST00000607547 219 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AL159169.3-201ENST00000608871 561 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AP001521.1-201ENST00000609150 300 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AC096577.2-201ENST00000611455 153 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AL031667.3-201ENST00000620124 655 ntBASIC4.24□□□□□ -1.73
MMP3P08254 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MMP3P08254 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
MMP3P08254 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MMP3P08254 MTND5P24-201ENST00000438892 1767 ntBASIC4.24□□□□□ -1.73
MMP3P08254 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.24□□□□□ -1.73
MMP3P08254 MTND4P34-201ENST00000572715 1371 ntBASIC4.24□□□□□ -1.73
MMP3P08254 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.24□□□□□ -1.73
MMP3P08254 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MMP3P08254 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
MMP3P08254 OR5BR1P-201ENST00000524992 1330 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC011477.1-204ENST00000623416 1325 ntBASIC4.23□□□□□ -1.73
MMP3P08254 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MMP3P08254 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MMP3P08254 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
MMP3P08254 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 RNU6-374P-201ENST00000364146 108 ntBASIC4.23□□□□□ -1.73
MMP3P08254 RNU6-660P-201ENST00000364566 109 ntBASIC4.23□□□□□ -1.73
MMP3P08254 MIR491-201ENST00000384877 84 ntBASIC4.23□□□□□ -1.73
MMP3P08254 MIR34B-201ENST00000385076 84 ntBASIC4.23□□□□□ -1.73
MMP3P08254 MT-TH-201ENST00000387441 69 ntBASIC4.23□□□□□ -1.73
MMP3P08254 SNORA26.8-201ENST00000391306 124 ntBASIC4.23□□□□□ -1.73
MMP3P08254 SOD2P1-201ENST00000396543 562 ntBASIC4.23□□□□□ -1.73
MMP3P08254 CYCSP45-201ENST00000402289 315 ntBASIC4.23□□□□□ -1.73
MMP3P08254 HNRNPDP2-201ENST00000406475 478 ntBASIC4.23□□□□□ -1.73
MMP3P08254 RPL31P52-201ENST00000407532 367 ntBASIC4.23□□□□□ -1.73
MMP3P08254 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.23□□□□□ -1.73
MMP3P08254 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 AL590103.1-201ENST00000434488 307 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC129850.1-201ENST00000436203 508 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC069285.2-201ENST00000440210 275 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.23□□□□□ -1.73
MMP3P08254 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 SLC31A1P1-201ENST00000451221 567 ntBASIC4.23□□□□□ -1.73
MMP3P08254 RPL18AP17-201ENST00000455326 198 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 MTND4LP3-201ENST00000468320 276 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC068724.1-201ENST00000487100 792 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 FTH1P24-201ENST00000503502 462 ntBASIC4.23□□□□□ -1.73
MMP3P08254 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 RPL12P22-201ENST00000519073 490 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.23□□□□□ -1.73
MMP3P08254 SMARCE1P4-201ENST00000523647 241 ntBASIC4.23□□□□□ -1.73
MMP3P08254 OR5M7P-201ENST00000526140 972 ntBASIC4.23□□□□□ -1.73
MMP3P08254 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 AC007954.1-201ENST00000554198 494 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AGGF1P8-201ENST00000562979 1000 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.23□□□□□ -1.73
MMP3P08254 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.23□□□□□ -1.73
MMP3P08254 AF131215.7-201ENST00000602443 707 ntBASIC4.23□□□□□ -1.73
MMP3P08254 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 476.2 ms