Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC055876.1-202ENST00000567053 138 ntBASIC2.78□□□□□ -1.96
CD74P04233 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CD74P04233 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.78□□□□□ -1.96
CD74P04233 BNIP3P22-201ENST00000593399 556 ntBASIC2.78□□□□□ -1.96
CD74P04233 AC008687.2-201ENST00000597865 520 ntBASIC2.78□□□□□ -1.96
CD74P04233 AC103881.1-201ENST00000603476 538 ntBASIC2.78□□□□□ -1.96
CD74P04233 BNIP3P4-201ENST00000604946 565 ntBASIC2.78□□□□□ -1.96
CD74P04233 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.78□□□□□ -1.96
CD74P04233 AC084824.5-201ENST00000612009 413 ntBASIC2.78□□□□□ -1.96
CD74P04233 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.78□□□□□ -1.96
CD74P04233 AL590240.3-201ENST00000621416 943 ntBASIC2.78□□□□□ -1.96
CD74P04233 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.78□□□□□ -1.96
CD74P04233 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CD74P04233 AL365440.1-201ENST00000436135 2167 ntBASIC2.78□□□□□ -1.96
CD74P04233 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
CD74P04233 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CD74P04233 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.78□□□□□ -1.97
CD74P04233 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CD74P04233 MTCO1P4-201ENST00000520516 1409 ntBASIC2.77□□□□□ -1.97
CD74P04233 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CD74P04233 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CD74P04233 AL355578.1-201ENST00000607405 1328 ntBASIC2.77□□□□□ -1.97
CD74P04233 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 AL645937.1-201ENST00000641739 1652 ntBASIC2.77□□□□□ -1.97
CD74P04233 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 RNA5SP197-201ENST00000363357 119 ntBASIC2.77□□□□□ -1.97
CD74P04233 AC007066.1-201ENST00000392902 381 ntBASIC2.77□□□□□ -1.97
CD74P04233 AP002784.2-201ENST00000397300 549 ntBASIC2.77□□□□□ -1.97
CD74P04233 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.77□□□□□ -1.97
CD74P04233 AC245054.2-201ENST00000415639 319 ntBASIC2.77□□□□□ -1.97
CD74P04233 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.77□□□□□ -1.97
CD74P04233 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
CD74P04233 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 AL035246.1-201ENST00000433554 1255 ntBASIC2.77□□□□□ -1.97
CD74P04233 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.77□□□□□ -1.97
CD74P04233 SNRPEP4-201ENST00000435815 279 ntBASIC2.77□□□□□ -1.97
CD74P04233 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.77□□□□□ -1.97
CD74P04233 HSFY3P-201ENST00000444242 1191 ntBASIC2.77□□□□□ -1.97
CD74P04233 HMGB3P6-201ENST00000444896 598 ntBASIC2.77□□□□□ -1.97
CD74P04233 AL929288.2-201ENST00000446368 407 ntBASIC2.77□□□□□ -1.97
CD74P04233 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.77□□□□□ -1.97
CD74P04233 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 SNORD105B-201ENST00000458770 79 ntBASIC2.77□□□□□ -1.97
CD74P04233 AC008379.1-201ENST00000463655 464 ntBASIC2.77□□□□□ -1.97
CD74P04233 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CD74P04233 RPS26P21-201ENST00000475397 348 ntBASIC2.77□□□□□ -1.97
CD74P04233 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.77□□□□□ -1.97
CD74P04233 HMGB1P22-201ENST00000505315 124 ntBASIC2.77□□□□□ -1.97
CD74P04233 RNU6-202P-201ENST00000515998 96 ntBASIC2.77□□□□□ -1.97
CD74P04233 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 AC239860.2-201ENST00000525886 270 ntBASIC2.77□□□□□ -1.97
CD74P04233 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.77□□□□□ -1.97
CD74P04233 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CD74P04233 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 AC034268.2-201ENST00000571784 482 ntBASIC2.77□□□□□ -1.97
CD74P04233 AC107982.3-201ENST00000584957 985 ntBASIC2.77□□□□□ -1.97
CD74P04233 OR4G1P-201ENST00000588632 938 ntBASIC2.77□□□□□ -1.97
CD74P04233 AL355812.1-201ENST00000603215 216 ntBASIC2.77□□□□□ -1.97
CD74P04233 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.77□□□□□ -1.97
CD74P04233 U3.45-201ENST00000607547 219 ntBASIC2.77□□□□□ -1.97
CD74P04233 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.77□□□□□ -1.97
CD74P04233 AP005229.2-201ENST00000609980 697 ntBASIC2.77□□□□□ -1.97
CD74P04233 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.77□□□□□ -1.97
CD74P04233 MIR6075-201ENST00000620782 95 ntBASIC2.77□□□□□ -1.97
CD74P04233 AC039056.2-201ENST00000622261 511 ntBASIC2.77□□□□□ -1.97
CD74P04233 AC091903.1-201ENST00000624322 454 ntBASIC2.77□□□□□ -1.97
CD74P04233 AL109659.3-201ENST00000624985 950 ntBASIC2.77□□□□□ -1.97
CD74P04233 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CD74P04233 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 AL353743.1-202ENST00000431724 1695 ntBASIC2.76□□□□□ -1.97
CD74P04233 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CD74P04233 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CD74P04233 RNU1-70P-201ENST00000362618 164 ntBASIC2.76□□□□□ -1.97
CD74P04233 SNORD65C-201ENST00000390962 71 ntBASIC2.76□□□□□ -1.97
CD74P04233 RNA5SP171-201ENST00000391071 115 ntBASIC2.76□□□□□ -1.97
CD74P04233 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CD74P04233 AL591034.1-201ENST00000407447 340 ntBASIC2.76□□□□□ -1.97
CD74P04233 RN7SKP58-201ENST00000411010 305 ntBASIC2.76□□□□□ -1.97
CD74P04233 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
CD74P04233 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CD74P04233 FO393414.1-201ENST00000428697 1184 ntBASIC2.76□□□□□ -1.97
CD74P04233 RPL36P19-201ENST00000430744 301 ntBASIC2.76□□□□□ -1.97
CD74P04233 AL445584.1-201ENST00000431451 330 ntBASIC2.76□□□□□ -1.97
CD74P04233 AL050321.1-201ENST00000432363 400 ntBASIC2.76□□□□□ -1.97
CD74P04233 ATP5C1P1-201ENST00000441945 895 ntBASIC2.76□□□□□ -1.97
CD74P04233 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.76□□□□□ -1.97
CD74P04233 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 AC140076.1-201ENST00000449897 361 ntBASIC2.76□□□□□ -1.97
CD74P04233 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 AC008885.2-201ENST00000509506 930 ntBASIC2.76□□□□□ -1.97
CD74P04233 RNU6-711P-201ENST00000517255 106 ntBASIC2.76□□□□□ -1.97
CD74P04233 HMGB1P1-201ENST00000522557 636 ntBASIC2.76□□□□□ -1.97
CD74P04233 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.76□□□□□ -1.97
CD74P04233 AP003385.6-201ENST00000531603 374 ntBASIC2.76□□□□□ -1.97
CD74P04233 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.76□□□□□ -1.97
CD74P04233 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 MIR4789-201ENST00000577469 82 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms