Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A1P02462 AL021368.2-201ENST00000606125 5352 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A1P02462 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A1P02462 MIR21-201ENST00000362134 72 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
COL4A1P02462 OR5H15-201ENST00000383696 930 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 RNU6-76P-201ENST00000384060 104 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 HMGB1P11-201ENST00000413899 637 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 DPH3P2-201ENST00000422618 250 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.85□□□□□ -1.95
COL4A1P02462 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
COL4A1P02462 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A1P02462 AC008837.1-201ENST00000511513 412 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A1P02462 AL845331.3-202ENST00000562856 261 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.85□□□□□ -1.95
COL4A1P02462 AC009318.2-201ENST00000610917 651 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
COL4A1P02462 AL445437.1-201ENST00000623157 3087 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A1P02462 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A1P02462 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.84□□□□□ -1.95
COL4A1P02462 FRG1BP-201ENST00000278882 761 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A1P02462 GSTA12P-201ENST00000402398 508 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 Z98742.2-201ENST00000431564 187 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.84□□□□□ -1.95
COL4A1P02462 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
COL4A1P02462 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A1P02462 AC114982.2-201ENST00000461396 358 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.84□□□□□ -1.95
COL4A1P02462 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A1P02462 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A1P02462 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
COL4A1P02462 DEFB122-202ENST00000569013 197 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 NTAN1P1-201ENST00000603150 646 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 AL450489.1-201ENST00000612071 468 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.84□□□□□ -1.95
COL4A1P02462 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A1P02462 AC099063.3-201ENST00000642066 185 ntBASIC2.84□□□□□ -1.95
COL4A1P02462 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.84□□□□□ -1.96
COL4A1P02462 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A1P02462 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
COL4A1P02462 RNU1-73P-201ENST00000383971 164 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 RNA5SP247-201ENST00000411181 105 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 RPS15AP28-201ENST00000435088 386 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.83□□□□□ -1.96
COL4A1P02462 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.83□□□□□ -1.96
COL4A1P02462 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
COL4A1P02462 MIR3186-201ENST00000577404 85 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 BX664608.1-201ENST00000610519 487 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 MIR6766-201ENST00000622641 72 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 MIR6715B-201ENST00000637172 77 ntBASIC2.83□□□□□ -1.96
COL4A1P02462 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.83□□□□□ -1.96
COL4A1P02462 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A1P02462 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A1P02462 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A1P02462 RPL21P132-201ENST00000331267 462 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 MIR365B-201ENST00000362317 111 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 RN7SKP32-201ENST00000410167 303 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 RNU2-2P-201ENST00000410396 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AL139156.1-201ENST00000412785 841 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AC012498.1-201ENST00000424037 437 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 RPS6P12-201ENST00000432491 726 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AC104389.3-201ENST00000445629 235 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A1P02462 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A1P02462 RFPL1S-203ENST00000539579 330 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A1P02462 MIR5007-201ENST00000583098 95 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.15-201ENST00000611544 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.16-201ENST00000613119 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.12-201ENST00000613778 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.20-201ENST00000613956 192 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.9-201ENST00000615427 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.11-201ENST00000616345 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.2-201ENST00000616535 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.3-201ENST00000617785 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.19-201ENST00000618602 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 RNU2-1-201ENST00000618664 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.6-201ENST00000619225 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.5-201ENST00000619465 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 U2.10-201ENST00000620268 191 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AC104454.1-201ENST00000421341 1401 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
COL4A1P02462 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A1P02462 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL4A1P02462 AL591806.2-201ENST00000433122 173 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A1P02462 RPL9P32-201ENST00000464118 620 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A1P02462 AC092436.1-201ENST00000506450 503 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A1P02462 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.82□□□□□ -1.96
COL4A1P02462 HMGB3P26-201ENST00000560051 582 ntBASIC2.82□□□□□ -1.96
COL4A1P02462 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A1P02462 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A1P02462 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms