Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EXTL2P1-201ENST00000446218 416 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AC108938.1-201ENST00000451204 136 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 RN7SL93P-201ENST00000463035 293 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 RPL21P18-201ENST00000469899 480 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP1P01033 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC068305.1-201ENST00000497406 726 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 SNORA70.14-201ENST00000516205 110 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 RNU2-58P-201ENST00000516403 183 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 IGLVIV-53-201ENST00000520107 367 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.39□□□□□ -1.87
TIMP1P01033 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AP003066.2-201ENST00000529375 555 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC011611.5-201ENST00000552477 578 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP1P01033 AC095057.3-201ENST00000567102 1157 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AP000919.1-202ENST00000581139 1264 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 RN7SL622P-201ENST00000585292 275 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 RNA5SP108-201ENST00000605921 117 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AC121761.2-201ENST00000617300 689 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 AP003476.1-201ENST00000623984 516 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP1P01033 AC022031.1-201ENST00000585985 2593 ntBASIC3.39□□□□□ -1.87
TIMP1P01033 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TIMP1P01033 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 AC062016.1-201ENST00000355719 319 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TIMP1P01033 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP1P01033 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP1P01033 UBE2V1P9-201ENST00000414760 368 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP1P01033 PTP4A1P5-201ENST00000420305 455 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 NUP35P1-201ENST00000422734 947 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP1P01033 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP1P01033 AC108734.1-201ENST00000439549 399 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC092170.1-201ENST00000440211 356 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP1P01033 HSFY3P-201ENST00000444242 1191 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP1P01033 RPL37P6-202ENST00000464216 403 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC083906.5-201ENST00000503722 328 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP1P01033 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.38□□□□□ -1.87
TIMP1P01033 AC104108.1-201ENST00000509930 412 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 COX6CP8-201ENST00000522620 226 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC104115.2-201ENST00000523026 687 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP1P01033 AC019227.1-201ENST00000526902 510 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC087894.1-201ENST00000538359 518 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC090751.1-201ENST00000566966 267 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 HMGB1P6-201ENST00000569046 646 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC141257.3-201ENST00000572906 215 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 MIR4644-201ENST00000579929 84 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 MIR4435-1-201ENST00000582552 80 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 ATP1B3P1-201ENST00000605365 821 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC007275.1-201ENST00000621243 671 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 AC010149.2-201ENST00000637608 315 ntBASIC3.38□□□□□ -1.87
TIMP1P01033 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.38□□□□□ -1.87
TIMP1P01033 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.38□□□□□ -1.87
TIMP1P01033 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TIMP1P01033 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP1P01033 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.37□□□□□ -1.87
TIMP1P01033 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP1P01033 RNA5SP391-201ENST00000363456 119 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.37□□□□□ -1.87
TIMP1P01033 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP1P01033 RPL7P25-201ENST00000404151 721 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 MIR1261-201ENST00000408659 82 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 MIR1183-201ENST00000408856 89 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.37□□□□□ -1.87
TIMP1P01033 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.37□□□□□ -1.87
TIMP1P01033 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.37□□□□□ -1.87
TIMP1P01033 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.37□□□□□ -1.87
TIMP1P01033 AC241520.1-201ENST00000422654 1099 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 RPL23AP82-202ENST00000427528 469 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.37□□□□□ -1.87
TIMP1P01033 AL035407.1-201ENST00000429211 571 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 HSFY7P-201ENST00000432672 318 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 AC011242.1-201ENST00000433596 1158 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 CST9LP2-201ENST00000437612 320 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 HSFY8P-201ENST00000437934 318 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 AL138799.3-201ENST00000438968 350 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 RPS7P5-201ENST00000441482 581 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 RPS24P13-201ENST00000442520 397 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.37□□□□□ -1.87
TIMP1P01033 GXYLT1P1-201ENST00000446657 490 ntBASIC3.37□□□□□ -1.87
TIMP1P01033 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms