Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCF11O94913 RPL23AP74-201ENST00000437246 471 ntBASIC4□□□□□ -1.77
PCF11O94913 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4□□□□□ -1.77
PCF11O94913 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4□□□□□ -1.77
PCF11O94913 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCF11O94913 OR6K1P-201ENST00000456766 971 ntBASIC4□□□□□ -1.77
PCF11O94913 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4□□□□□ -1.77
PCF11O94913 MTCYBP19-201ENST00000517463 1124 ntBASIC4□□□□□ -1.77
PCF11O94913 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4□□□□□ -1.77
PCF11O94913 OR8L1P-201ENST00000534005 955 ntBASIC4□□□□□ -1.77
PCF11O94913 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4□□□□□ -1.77
PCF11O94913 AC055876.1-202ENST00000567053 138 ntBASIC4□□□□□ -1.77
PCF11O94913 AC009101.1-201ENST00000568135 242 ntBASIC4□□□□□ -1.77
PCF11O94913 MIR1273D-201ENST00000577266 86 ntBASIC4□□□□□ -1.77
PCF11O94913 AC022069.1-201ENST00000582910 658 ntBASIC4□□□□□ -1.77
PCF11O94913 AC079228.1-201ENST00000624774 1049 ntBASIC4□□□□□ -1.77
PCF11O94913 CRYM-AS1-204ENST00000637983 556 ntBASIC4□□□□□ -1.77
PCF11O94913 CUL4AP1-201ENST00000514750 1863 ntBASIC4□□□□□ -1.77
PCF11O94913 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCF11O94913 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCF11O94913 Y_RNA.140-201ENST00000363474 103 ntBASIC3.99□□□□□ -1.77
PCF11O94913 AL589994.1-201ENST00000404962 340 ntBASIC3.99□□□□□ -1.77
PCF11O94913 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.99□□□□□ -1.77
PCF11O94913 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.99□□□□□ -1.77
PCF11O94913 MORF4L1P6-201ENST00000418771 268 ntBASIC3.99□□□□□ -1.77
PCF11O94913 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.99□□□□□ -1.77
PCF11O94913 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.99□□□□□ -1.77
PCF11O94913 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCF11O94913 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCF11O94913 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.98□□□□□ -1.77
PCF11O94913 RPL9P7-201ENST00000330965 580 ntBASIC3.98□□□□□ -1.77
PCF11O94913 MIR27B-201ENST00000385129 97 ntBASIC3.98□□□□□ -1.77
PCF11O94913 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.98□□□□□ -1.77
PCF11O94913 RPL30P9-201ENST00000465586 330 ntBASIC3.98□□□□□ -1.77
PCF11O94913 AC234781.5-201ENST00000508429 271 ntBASIC3.98□□□□□ -1.77
PCF11O94913 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.98□□□□□ -1.77
PCF11O94913 RNA5SP380-201ENST00000517190 98 ntBASIC3.98□□□□□ -1.77
PCF11O94913 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
PCF11O94913 HMGB3P26-201ENST00000560051 582 ntBASIC3.98□□□□□ -1.77
PCF11O94913 AC004696.1-201ENST00000614345 607 ntBASIC3.98□□□□□ -1.77
PCF11O94913 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.98□□□□□ -1.77
PCF11O94913 AC002543.1-201ENST00000299783 1954 ntBASIC3.98□□□□□ -1.77
PCF11O94913 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.98□□□□□ -1.77
PCF11O94913 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PCF11O94913 RAD1P1-201ENST00000231383 813 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.97□□□□□ -1.77
PCF11O94913 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.97□□□□□ -1.77
PCF11O94913 AL353597.2-202ENST00000434901 373 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.97□□□□□ -1.77
PCF11O94913 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.97□□□□□ -1.77
PCF11O94913 AC008716.1-201ENST00000511084 513 ntBASIC3.97□□□□□ -1.77
PCF11O94913 RNU6-1053P-201ENST00000515930 101 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCF11O94913 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.97□□□□□ -1.77
PCF11O94913 AC022884.3-201ENST00000579571 248 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.97□□□□□ -1.77
PCF11O94913 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCF11O94913 PHKBP1-201ENST00000450951 1951 ntBASIC3.97□□□□□ -1.77
PCF11O94913 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCF11O94913 AC006020.1-201ENST00000420179 1854 ntBASIC3.97□□□□□ -1.77
PCF11O94913 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.97□□□□□ -1.77
PCF11O94913 DPH3P2-201ENST00000422618 250 ntBASIC3.97□□□□□ -1.77
PCF11O94913 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PCF11O94913 RN7SKP210-201ENST00000459176 261 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC005921.1-201ENST00000510589 286 ntBASIC3.97□□□□□ -1.77
PCF11O94913 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.97□□□□□ -1.77
PCF11O94913 RN7SKP24-201ENST00000515888 284 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC018630.1-201ENST00000541376 925 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC009163.5-201ENST00000575421 637 ntBASIC3.97□□□□□ -1.77
PCF11O94913 AC092628.2-201ENST00000622492 339 ntBASIC3.97□□□□□ -1.77
PCF11O94913 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.97□□□□□ -1.77
PCF11O94913 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.97□□□□□ -1.77
PCF11O94913 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
PCF11O94913 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCF11O94913 RNU6-984P-201ENST00000363236 109 ntBASIC3.96□□□□□ -1.78
PCF11O94913 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCF11O94913 NANOGP5-201ENST00000424456 877 ntBASIC3.96□□□□□ -1.78
PCF11O94913 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.96□□□□□ -1.78
PCF11O94913 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.96□□□□□ -1.78
PCF11O94913 AL162388.1-201ENST00000450912 352 ntBASIC3.96□□□□□ -1.78
PCF11O94913 AC011037.1-201ENST00000483964 558 ntBASIC3.96□□□□□ -1.78
PCF11O94913 RPL36AP51-201ENST00000487216 318 ntBASIC3.96□□□□□ -1.78
PCF11O94913 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.96□□□□□ -1.78
PCF11O94913 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.96□□□□□ -1.78
PCF11O94913 AP001207.1-201ENST00000524051 481 ntBASIC3.96□□□□□ -1.78
PCF11O94913 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.96□□□□□ -1.78
PCF11O94913 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.96□□□□□ -1.78
PCF11O94913 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.96□□□□□ -1.78
PCF11O94913 AC007938.3-201ENST00000604965 623 ntBASIC3.96□□□□□ -1.78
PCF11O94913 AC116447.1-201ENST00000613153 453 ntBASIC3.96□□□□□ -1.78
PCF11O94913 AP006248.2-201ENST00000623309 592 ntBASIC3.96□□□□□ -1.78
PCF11O94913 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCF11O94913 AL445437.1-201ENST00000623157 3087 ntBASIC3.96□□□□□ -1.78
PCF11O94913 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.96□□□□□ -1.78
PCF11O94913 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.96□□□□□ -1.78
PCF11O94913 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCF11O94913 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.95□□□□□ -1.78
PCF11O94913 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.95□□□□□ -1.78
PCF11O94913 EI24P2-201ENST00000397776 1076 ntBASIC3.95□□□□□ -1.78
PCF11O94913 BTF3P7-201ENST00000407097 488 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms