Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SNORA23-201ENST00000365128 182 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 MIR191-201ENST00000384873 92 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 Y_RNA.793-201ENST00000411222 111 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC099677.3-201ENST00000427081 395 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AL158071.1-201ENST00000430315 461 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC108479.1-201ENST00000431142 427 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.67□□□□□ -1.34
ACTN4O43707 AL031274.1-201ENST00000450334 232 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 KF459542.1-201ENST00000450908 553 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 FRG2FP-204ENST00000453982 852 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC005017.1-201ENST00000482002 490 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AP002453.1-201ENST00000492327 668 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 RN7SL362P-201ENST00000494228 267 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ACTN4O43707 RNU6-685P-201ENST00000517088 95 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 AL133153.1-201ENST00000557756 303 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.67□□□□□ -1.34
ACTN4O43707 AC008521.1-201ENST00000587471 187 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC011500.1-201ENST00000601963 469 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC008162.1-201ENST00000604718 254 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AL670379.4-201ENST00000605279 254 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC064801.1-201ENST00000612025 407 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC073488.3-201ENST00000631611 778 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
ACTN4O43707 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
ACTN4O43707 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.67□□□□□ -1.34
ACTN4O43707 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
ACTN4O43707 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ACTN4O43707 RBPJP2-201ENST00000618187 1444 ntBASIC6.67□□□□□ -1.34
ACTN4O43707 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ACTN4O43707 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.67□□□□□ -1.34
ACTN4O43707 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
ACTN4O43707 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 RNY3P11-201ENST00000364153 102 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 RNU6-434P-201ENST00000384376 107 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.66□□□□□ -1.34
ACTN4O43707 AC093106.2-201ENST00000428212 385 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AL590399.4-201ENST00000436561 601 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AL663074.2-201ENST00000440621 479 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.66□□□□□ -1.34
ACTN4O43707 RN7SL269P-201ENST00000467795 305 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC098818.1-201ENST00000478593 252 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC083795.1-201ENST00000491760 320 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC112484.3-201ENST00000505910 329 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.66□□□□□ -1.34
ACTN4O43707 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ACTN4O43707 RNU6-64P-201ENST00000517119 105 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 HMGN1P28-201ENST00000521340 364 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC025423.5-201ENST00000550230 219 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 uc_338.31-201ENST00000615595 186 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AL159153.1-201ENST00000619688 317 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.66□□□□□ -1.34
ACTN4O43707 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ACTN4O43707 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ACTN4O43707 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ACTN4O43707 AC130650.2-201ENST00000618736 2403 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 AC027287.1-201ENST00000553115 1453 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
ACTN4O43707 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ACTN4O43707 AC083837.1-201ENST00000565297 2994 ntBASIC6.66□□□□□ -1.34
ACTN4O43707 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
ACTN4O43707 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.65□□□□□ -1.34
ACTN4O43707 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
ACTN4O43707 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 GNL2P1-201ENST00000451274 2190 ntBASIC6.65□□□□□ -1.34
ACTN4O43707 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ACTN4O43707 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms